RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ARHGAP8P85298 464 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 ARL13BQ3SXY8 428 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 KCTD21Q4G0X4 260 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 SPOPLQ6IQ16 392 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 DRICH1Q6PGQ1 229 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 IYDQ6PHW0 289 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 CYP2U1Q7Z449 544 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 ZNF804AQ7Z570 1209 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 AMIGO2Q86SJ2 522 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 NLRP10Q86W26 655 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 POU5F2Q8N7G0 328 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 ZNF420Q8TAQ5 688 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 SLC20A1Q8WUM9 679 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 APBB2Q92870 758 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 OTUD5Q96G74 571 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 PAFAH2Q99487 392 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 TDRD1Q9BXT4 1180 aaKnown RBP9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 HIPK3Q9H422 1215 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 ZNF804BA4D1E1 1349 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 NHSQ6T4R5 1651 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 C2orf71A6NGG8 1288 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 SDR42E2A6NKP2 422 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 KLRF2D3W0D1 207 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 SIN3BO75182 1162 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 SULT1C4O75897 302 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 PARNO95453 639 aaKnown RBP9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 VDRP11473 427 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 PABPC1P11940 636 aaKnown RBP9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 MYL4P12829 197 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 TTKP33981 857 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 CASP4P49662 377 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 ERFP50548 548 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 ADCY7P51828 1080 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 HNRNPFP52597 415 aaKnown RBP9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 DYNLL1P63167 89 aaKnown RBP9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 DLG4P78352 724 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 TXNL4AP83876 142 aaKnown RBP9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 RGS21Q2M5E4 152 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 CIAPIN1Q6FI81 312 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 PPP1R18Q6NYC8 613 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 GPR180Q86V85 440 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 CRLF3Q8IUI8 442 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 FBXW8Q8N3Y1 598 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 MINDY2Q8NBR6 621 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 ZCRB1Q8TBF4 217 aaKnown RBP9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 DCAKDQ8WVC6 231 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 SLC5A5Q92911 643 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 TTC17Q96AE7 1141 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 CTRCQ99895 268 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 PAIP1Q9H074 479 aaKnown RBP9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 SMYD3Q9H7B4 428 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 C10orf88Q9H8K7 445 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 DCP1AQ9NPI6 582 aaPredicted RBP9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 GNEQ9Y223 722 aaKnown RBP9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 AXIN2Q9Y2T1 843 aa9.4□□□□□ -0.91
SMARCE1-207ENST00000469334 PSME4Q14997 1843 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 ZNF536O15090 1300 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 FOXN3O00409 490 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 PSTPIP1O43586 416 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 XPOTO43592 962 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 H6PDO95479 791 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 ZBTB11O95625 1053 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 INHBBP09529 407 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 GAP43P17677 238 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 GSSP48637 474 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 PCYT1AP49585 367 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 BCAMP50895 628 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 SLC5A3P53794 718 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 SLC15A2Q16348 729 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 MOGQ16653 247 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 ARHGAP44Q17R89 818 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 SMUG1Q53HV7 270 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 MDH1BQ5I0G3 518 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 C16orf87Q6PH81 154 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 FRA10AC1Q70Z53 315 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 GSTA5Q7RTV2 222 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 GPR141Q7Z602 305 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 PCGF5Q86SE9 256 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 CHERPQ8IWX8 916 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 PPM1KQ8N3J5 372 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 PCYOX1LQ8NBM8 494 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 HELBQ8NG08 1087 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 NLRP7Q8WX94 980 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 SH3GL1Q99961 368 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 PSD2Q9BQI7 771 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 OSBPL10Q9BXB5 764 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 NDEL1Q9GZM8 345 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 ZHX3Q9H4I2 956 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 VTA1Q9NP79 307 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 PCDHA12Q9UN75 941 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 PCDHB13Q9Y5F0 798 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 NAV1Q8NEY1 1877 aa9.39□□□□□ -0.91
SMARCE1-207ENST00000469334 TRIM64CA6NLI5 447 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 MEI4A8MW99 385 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 ERVV-2B6SEH9 535 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 KPNA4O00629 521 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 AQP9O43315 295 aa9.38□□□□□ -0.91
SMARCE1-207ENST00000469334 ADAMTS2O95450 1211 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms