RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 LRRC38Q5VT99 294 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 KATNAL2Q8IYT4 538 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 PCED1BQ96HM7 432 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 PIWIL1Q96J94 861 aaKnown RBP19.95■□□□□ 0.78
SMC4-209ENST00000468653 TMEM106CQ9BVX2 250 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 KRT82Q9NSB4 513 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 ASNSD1Q9NWL6 643 aa19.95■□□□□ 0.78
SMC4-209ENST00000468653 TADA2AO75478 443 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 GRAP2O75791 330 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 RNF8O76064 485 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 ZRANB2O95218 330 aaKnown RBP eCLIP19.94■□□□□ 0.78
SMC4-209ENST00000468653 GPD1P21695 349 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 RPL34P49207 117 aaKnown RBP19.94■□□□□ 0.78
SMC4-209ENST00000468653 MRPS25P82663 173 aaKnown RBP19.94■□□□□ 0.78
SMC4-209ENST00000468653 IKBKEQ14164 716 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 ACAP1Q15027 740 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 LRRC26Q2I0M4 334 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 INTS6LQ5JSJ4 861 aaKnown RBP19.94■□□□□ 0.78
SMC4-209ENST00000468653 FAM35AQ86V20 835 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 PIGZQ86VD9 579 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 SLC13A5Q86YT5 568 aaPredicted RBP19.94■□□□□ 0.78
SMC4-209ENST00000468653 CCDC50Q8IVM0 306 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 RXFP2Q8WXD0 754 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 NRDE2Q9H7Z3 1164 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 RAB21Q9UL25 225 aa19.94■□□□□ 0.78
SMC4-209ENST00000468653 AP1G2O75843 785 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 HSPA1AP0DMV8 641 aaKnown RBP19.93■□□□□ 0.78
SMC4-209ENST00000468653 HSPA1BP0DMV9 641 aaKnown RBP19.93■□□□□ 0.78
SMC4-209ENST00000468653 PDGFRAP16234 1089 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 MCM3P25205 808 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 ZNF143P52747 638 aaPredicted RBP19.93■□□□□ 0.78
SMC4-209ENST00000468653 MAP3K7CLP57077 242 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 YWHAHQ04917 246 aaPredicted RBP19.93■□□□□ 0.78
SMC4-209ENST00000468653 BRD3Q15059 726 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 HADHQ16836 314 aaKnown RBP19.93■□□□□ 0.78
SMC4-209ENST00000468653 ODF2Q5BJF6 829 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 CNKSR3Q6P9H4 555 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 CLEC20AQ6ZU45 233 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 EXD1Q8NHP7 514 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 CNPY3Q9BT09 278 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 MRPL9Q9BYD2 267 aaKnown RBP19.93■□□□□ 0.78
SMC4-209ENST00000468653 MTUS1Q9ULD2 1270 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 TTC3P53804 2025 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 C2CD4BA6NLJ0 364 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 TBKBP1A7MCY6 615 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 BEST1O76090 585 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 ALDH2P05091 517 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 TCF4P15884 667 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 RFC2P35250 354 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 CETN2P41208 172 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 CLCN6P51797 869 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 TSPY1Q01534 308 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 SLC7A5Q01650 507 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 SMC1AQ14683 1233 aaKnown RBP19.93■□□□□ 0.78
SMC4-209ENST00000468653 PPP2R5EQ16537 467 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 WDR93Q6P2C0 686 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 NECAB2Q7Z6G3 386 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 CRIPAKQ8N1N5 446 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 HDAC7Q8WUI4 952 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 COLEC11Q9BWP8 271 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 DDX47Q9H0S4 455 aaKnown RBP19.93■□□□□ 0.78
SMC4-209ENST00000468653 LRRC4Q9HBW1 653 aa19.93■□□□□ 0.78
SMC4-209ENST00000468653 NRP1O14786 923 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 SART1O43290 800 aaKnown RBP19.92■□□□□ 0.78
SMC4-209ENST00000468653 LRCH4O75427 683 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 KRT1P04264 644 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 DESP17661 470 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 FLT3P36888 993 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 SCNN1AP37088 669 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 VSNL1P62760 191 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 TAF5Q15542 800 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 MAPRE1Q15691 268 aaKnown RBP19.92■□□□□ 0.78
SMC4-209ENST00000468653 FAM171BQ6P995 826 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 RCOR2Q8IZ40 523 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 KCTD13Q8WZ19 329 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 MYLPFQ96A32 169 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 SMARCD1Q96GM5 515 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 RBM41Q96IZ5 413 aaKnown RBP19.92■□□□□ 0.78
SMC4-209ENST00000468653 DDX56Q9NY93 547 aaKnown RBP19.92■□□□□ 0.78
SMC4-209ENST00000468653 NR2E1Q9Y466 385 aa19.92■□□□□ 0.78
SMC4-209ENST00000468653 CCDC151A5D8V7 595 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 ADIGQ0VDE8 80 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 LLGL1Q15334 1064 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 ATP13A4Q4VNC1 1196 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 TRNP1Q6NT89 227 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.91■□□□□ 0.784e-23■■■■■ 72.8
SMC4-209ENST00000468653 SLC26A9Q7LBE3 791 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 OR10T2Q8NGX3 314 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 CLEC4CQ8WTT0 213 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 MAIP1Q8WWC4 291 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 RNF25Q96BH1 459 aaPredicted RBP19.91■□□□□ 0.78
SMC4-209ENST00000468653 SLITRK6Q9H5Y7 841 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 PRDM5Q9NQX1 630 aaPredicted RBP19.91■□□□□ 0.78
SMC4-209ENST00000468653 STIM2Q9P246 746 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 DMGDHQ9UI17 866 aaKnown RBP19.91■□□□□ 0.78
SMC4-209ENST00000468653 ADAM28Q9UKQ2 775 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 FAN1Q9Y2M0 1017 aa19.91■□□□□ 0.78
SMC4-209ENST00000468653 FSCN2O14926 492 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 ERLIN1O75477 346 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 ZMYND10O75800 440 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms