RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CSF2RBP32927 897 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 VIPR2P41587 438 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 PNLIPRP1P54315 467 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 NR1H2P55055 460 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 CASP6P55212 293 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 LILRA4P59901 499 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 PIGFQ07326 219 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZNF844Q08AG5 666 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 ANKRD1Q15327 319 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 NPY5RQ15761 445 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 TBR1Q16650 682 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZNF827Q17R98 1081 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 BMT2Q1RMZ1 405 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 VWA3BQ502W6 1294 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 PRR31Q5SQ13 230 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 GPATCH4Q5T3I0 446 aaKnown RBP4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 FCRL6Q6DN72 434 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 FASTKD5Q7L8L6 764 aaKnown RBP4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZNF280BQ86YH2 543 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 TMEFF1Q8IYR6 380 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 KLHL36Q8N4N3 616 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 HERVK_113Q902F9 699 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 STAMQ92783 540 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZUFSPQ96AP4 578 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 YTHDC1Q96MU7 727 aaKnown RBP4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 PWWP2AQ96N64 755 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 CHCHD6Q9BRQ6 235 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 PAIP1Q9H074 479 aaKnown RBP4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 TP63Q9H3D4 680 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 FAM83DQ9H4H8 585 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 XPNPEP3Q9NQH7 507 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 PRDM8Q9NQV8 689 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 KRT84Q9NSB2 600 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 MRPS18AQ9NVS2 196 aaKnown RBP4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 FAM53CQ9NYF3 392 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 ORC3Q9UBD5 711 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 DKK4Q9UBT3 224 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 HESX1Q9UBX0 185 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 ASAP1Q9ULH1 1129 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 CA14Q9ULX7 337 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 DTNAQ9Y4J8 743 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 IRAK3Q9Y616 596 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 RAD54BQ9Y620 910 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 FGD5Q6ZNL6 1462 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 FANCD2Q9BXW9 1451 aa4.21□□□□□ -1.74
HMGB1P25-201ENST00000468402 PBRM1Q86U86 1689 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 RAPGEF2Q9Y4G8 1499 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 EFCAB8A8MWE9 144 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 E9PLN8 166 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 SRGAP2O75044 1071 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 RTN3O95197 1032 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 NTSR2O95665 410 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 DDX58O95786 925 aaKnown RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 LMNAP02545 664 aaKnown RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 PLA2G1BP04054 148 aaKnown RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 TK1P04183 234 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 ANXA6P08133 673 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 HNRNPA1P09651 372 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 ATXN1LP0C7T5 689 aaKnown RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 CPA1P15085 419 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 GNAT2P19087 354 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 RRM1P23921 792 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 PRKAR1BP31321 381 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 BUD31P41223 144 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 PXNP49023 591 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 VAMP2P63027 116 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 CHRNDQ07001 517 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 GRM4Q14833 912 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 TRIM71Q2Q1W2 868 aaKnown RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 NFRKBQ6P4R8 1299 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 PRR23BQ6ZRT6 265 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 SYT13Q7L8C5 426 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 FAM83AQ86UY5 434 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 CHD1LQ86WJ1 897 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 GAS2L3Q86XJ1 694 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 OR8H2Q8N162 312 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 TSPYL6Q8N831 410 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 TXNDC5Q8NBS9 432 aaKnown RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 SHCBP1Q8NEM2 672 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 BPIFB1Q8TDL5 484 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 ABHD5Q8WTS1 349 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 SNRNP27Q8WVK2 155 aaKnown RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 ST8SIA4Q92187 359 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 CPT1BQ92523 772 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 CENPIQ92674 756 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 RABGGTAQ92696 567 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 TRIB1Q96RU8 372 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 VKORC1Q9BQB6 163 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 CENPOQ9BU64 300 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 DDX23Q9BUQ8 820 aaKnown RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 TLR10Q9BXR5 811 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 REXO4Q9GZR2 422 aaKnown RBP4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 NELFAQ9H3P2 528 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 KCND3Q9UK17 655 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 ADAM29Q9UKF5 820 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 DAPP1Q9UN19 280 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 CDY1Q9Y6F8 540 aa4.2□□□□□ -1.74
HMGB1P25-201ENST00000468402 CUX2O14529 1486 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 CFTRP13569 1480 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms