RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ANKRD52Q8NB46 1076 aa7.26□□□□□ -1.25
SCAF4-204ENST00000467731 C1orf131Q8NDD1 294 aaKnown RBP7.26□□□□□ -1.25
SCAF4-204ENST00000467731 ACRBPQ8NEB7 543 aa7.26□□□□□ -1.25
SCAF4-204ENST00000467731 GDPD5Q8WTR4 605 aa7.26□□□□□ -1.25
SCAF4-204ENST00000467731 CPA5Q8WXQ8 436 aa7.26□□□□□ -1.25
SCAF4-204ENST00000467731 KRT82Q9NSB4 513 aa7.26□□□□□ -1.25
SCAF4-204ENST00000467731 TMEM30AQ9NV96 361 aa7.26□□□□□ -1.25
SCAF4-204ENST00000467731 IRAK3Q9Y616 596 aa7.26□□□□□ -1.25
SCAF4-204ENST00000467731 RPS6KL1Q9Y6S9 549 aa7.26□□□□□ -1.25
SCAF4-204ENST00000467731 GREB1Q4ZG55 1949 aa7.26□□□□□ -1.25
SCAF4-204ENST00000467731 MTMR11A4FU01 709 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 HIDE1A8MVS5 230 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 EIF3CLB5ME19 914 aaKnown RBP7.25□□□□□ -1.25
SCAF4-204ENST00000467731 TEX28O15482 410 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 BEST1O76090 585 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CXCL14O95715 111 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CNPP09543 421 aaKnown RBP7.25□□□□□ -1.25
SCAF4-204ENST00000467731 NPR3P17342 541 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 GPD2P43304 727 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CACNA2D1P54289 1103 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 BCAT1P54687 386 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 HNRNPH2P55795 449 aaKnown RBP7.25□□□□□ -1.25
SCAF4-204ENST00000467731 NOMO3P69849 1222 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 NFE2Q16621 373 aaPredicted RBP7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CLEC16AQ2KHT3 1053 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CCDC122Q5T0U0 273 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 NAA35Q5VZE5 725 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 C4orf50Q6ZRC1 276 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CLEC20AQ6ZU45 233 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 SPATA2LQ8IUW3 424 aaPredicted RBP7.25□□□□□ -1.25
SCAF4-204ENST00000467731 GPR65Q8IYL9 337 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 WDTC1Q8N5D0 677 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 ATAD1Q8NBU5 361 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 MICAL1Q8TDZ2 1067 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 EIF3CQ99613 913 aaKnown RBP7.25□□□□□ -1.25
SCAF4-204ENST00000467731 LHX5Q9H2C1 402 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CYTH4Q9UIA0 394 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 A0A1W2PPC1 479 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 H0YHG0 523 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 AP1G2O75843 785 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 LCA5LO95447 670 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 VNN2O95498 520 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 FAM200BP0CF97 657 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 GZMAP12544 262 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CYP2F1P24903 491 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CDH5P33151 784 aaPredicted RBP7.25□□□□□ -1.25
SCAF4-204ENST00000467731 MAP3K7CLP57077 242 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 SARNPP82979 210 aaKnown RBP7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CENPCQ03188 943 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 ADCY1Q08828 1119 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 BST2Q10589 180 aaKnown RBP7.25□□□□□ -1.25
SCAF4-204ENST00000467731 SMC1AQ14683 1233 aaKnown RBP7.25□□□□□ -1.25
SCAF4-204ENST00000467731 LRIT3Q3SXY7 679 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CFAP221Q4G0U5 840 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 C2CD6Q53TS8 623 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 PMF1Q6P1K2 205 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 TRIM72Q6ZMU5 477 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 TTC9BQ8N6N2 239 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 GOLGA6L1Q8N7Z2 621 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 TMEM35BQ8NCS4 154 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 SMARCD1Q96GM5 515 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 KCNK16Q96T55 309 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 DUSP16Q9BY84 665 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 CRISPLD1Q9H336 500 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 FNIP2Q9P278 1114 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 PYCARDQ9ULZ3 195 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 NENFQ9UMX5 172 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 SSX2IPQ9Y2D8 614 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 PAXBP1Q9Y5B6 917 aa7.25□□□□□ -1.25
SCAF4-204ENST00000467731 MYO16Q9Y6X6 1858 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 COL6A3P12111 3177 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 C2orf71A6NGG8 1288 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 ERICH4A6NGS2 130 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 LSM8O95777 96 aaKnown RBP7.24□□□□□ -1.25
SCAF4-204ENST00000467731 NSFP46459 744 aaKnown RBP7.24□□□□□ -1.25
SCAF4-204ENST00000467731 NDUFV1P49821 464 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 CREMQ03060 361 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 SMARCB1Q12824 385 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 PDCLQ13371 301 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 MRPL43Q8N983 215 aaKnown RBP7.24□□□□□ -1.25
SCAF4-204ENST00000467731 ZNF461Q8TAF7 563 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 SPPL2BQ8TCT7 592 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 SLC35F5Q8WV83 523 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 TSC1Q92574 1164 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 FUBP3Q96I24 572 aaKnown RBP eCLIP7.24□□□□□ -1.25
SCAF4-204ENST00000467731 SMOQ99835 787 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 PACSIN1Q9BY11 444 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 RXFP1Q9HBX9 757 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 NGRNQ9NPE2 291 aaKnown RBP7.24□□□□□ -1.25
SCAF4-204ENST00000467731 ST7Q9NRC1 585 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 REXO2Q9Y3B8 237 aaKnown RBP7.24□□□□□ -1.25
SCAF4-204ENST00000467731 PCDHB5Q9Y5E4 795 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 DOCK6Q96HP0 2047 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 F8VP50 259 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 RFXAPO00287 272 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 FSCN2O14926 492 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 RTN2O75298 545 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 ABLIM3O94929 683 aa7.24□□□□□ -1.25
SCAF4-204ENST00000467731 FTLP02792 175 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms