RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 DOCK8Q8NF50 2099 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 RSAD2Q8WXG1 361 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 CUL5Q93034 780 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 EVI5LQ96CN4 794 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 IGSF21Q96ID5 467 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 KREMEN1Q96MU8 473 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 BDH2Q9BUT1 245 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 SPATA9Q9BWV2 254 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 GPR62Q9BZJ7 368 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 PLEKHA4Q9H4M7 779 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 DCTPP1Q9H773 170 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 ZDHHC7Q9NXF8 308 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 DACT1Q9NYF0 836 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 RALYQ9UKM9 306 aaKnown RBP6.12□□□□□ -1.43
PTCD3-207ENST00000467273 TELO2Q9Y4R8 837 aa6.12□□□□□ -1.43
PTCD3-207ENST00000467273 FLNBO75369 2602 aaKnown RBP6.12□□□□□ -1.43
PTCD3-207ENST00000467273 NEDD4P46934 1319 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 CCDC195A0A1B0GUA6 201 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 ZNF213O14771 459 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 CBFA2T2O43439 604 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 ATP9AO75110 1047 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 GPR32O75388 356 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 PTMAP06454 111 aaKnown RBP6.11□□□□□ -1.43
PTCD3-207ENST00000467273 CNPP09543 421 aaKnown RBP6.11□□□□□ -1.43
PTCD3-207ENST00000467273 KLRC1P26715 233 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 CNR2P34972 360 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 METAP2P50579 478 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTCD3-207ENST00000467273 STAT5BP51692 787 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 WTAPQ15007 396 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 MLF2Q15773 248 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-207ENST00000467273 ZNF484Q5JVG2 852 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 CLLU1OSQ5K130 101 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 IFIT1BQ5T764 474 aaKnown RBP6.11□□□□□ -1.43
PTCD3-207ENST00000467273 TSHZ3Q63HK5 1081 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 HEATR6Q6AI08 1181 aaKnown RBP6.11□□□□□ -1.43
PTCD3-207ENST00000467273 UNQ6494/PRO21346Q6UXR6 183 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 MTSS1LQ765P7 747 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 HOMER1Q86YM7 354 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 TBC1D10CQ8IV04 446 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 GPR65Q8IYL9 337 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 ANKS4BQ8N8V4 417 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 SMARCC2Q8TAQ2 1214 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 MYADMQ96S97 322 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 PCYT2Q99447 389 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 UBAC1Q9BSL1 405 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 MYL10Q9BUA6 226 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 LGR4Q9BXB1 951 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 KRT23Q9C075 422 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 MKRN2Q9H000 416 aaKnown RBP6.11□□□□□ -1.43
PTCD3-207ENST00000467273 KLHL25Q9H0H3 589 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 EPN3Q9H201 632 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 LTB4R2Q9NPC1 389 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 MRPL17Q9NRX2 175 aaKnown RBP6.11□□□□□ -1.43
PTCD3-207ENST00000467273 SEMA4GQ9NTN9 838 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 KLHL42Q9P2K6 505 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 SLC9A2Q9UBY0 812 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 APEX2Q9UBZ4 518 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 MAD2L2Q9UI95 211 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 KCNH3Q9ULD8 1083 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 GINS2Q9Y248 185 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 MRPS17Q9Y2R5 130 aaKnown RBP6.11□□□□□ -1.43
PTCD3-207ENST00000467273 UBIAD1Q9Y5Z9 338 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.11□□□□□ -1.43
PTCD3-207ENST00000467273 CNOT1A5YKK6 2376 aaKnown RBP6.11□□□□□ -1.43
PTCD3-207ENST00000467273 WDFY3Q8IZQ1 3526 aa6.11□□□□□ -1.43
PTCD3-207ENST00000467273 MYH15Q9Y2K3 1946 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 IGKV6D-21A0A0A0MT36 114 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 ANKRD34BA5PLL1 514 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 MEIS2O14770 477 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 INPPL1O15357 1258 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 ZC3H11AO75152 810 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTCD3-207ENST00000467273 GALTP07902 379 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 MX1P20591 662 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 IBSPP21815 317 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-207ENST00000467273 ACTR2P61160 394 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 HAND2P61296 217 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 UBXN2BQ14CS0 331 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 KIZQ2M2Z5 673 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 LONRF3Q496Y0 759 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 SLC44A4Q53GD3 710 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 N4BP2L1Q5TBK1 243 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-207ENST00000467273 FAM160B1Q5W0V3 765 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 LRSAM1Q6UWE0 723 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 GLB1LQ6UWU2 654 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 ZNF513Q8N8E2 541 aaPredicted RBP6.1□□□□□ -1.43
PTCD3-207ENST00000467273 TRAPPC12Q8WVT3 735 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 AUTS2Q8WXX7 1259 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 SMG7Q92540 1137 aaKnown RBP6.1□□□□□ -1.43
PTCD3-207ENST00000467273 PHKBQ93100 1093 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 ZBTB10Q96DT7 871 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 SDF4Q9BRK5 362 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 JADE2Q9NQC1 790 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 MAN1C1Q9NR34 630 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 CHST12Q9NRB3 414 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 EBF1Q9UH73 591 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 NUMBLQ9Y6R0 609 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 MAST4O15021 2626 aa6.1□□□□□ -1.43
PTCD3-207ENST00000467273 DMXL2Q8TDJ6 3036 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 A0A1W2PQU0 124 aa6.09□□□□□ -1.43
PTCD3-207ENST00000467273 ZC3H12DA2A288 527 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms