RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TMEM39BQ9GZU3 492 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 ZWILCHQ9H900 591 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 SEPT9Q9UHD8 586 aaPredicted RBP13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 AGTPBP1Q9UPW5 1226 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 TCRBV9S1A1TA0A576 114 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 ANKRD33BA6NCL7 494 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 IL1BP01584 269 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 CD48P09326 243 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 KCNA3P22001 575 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 ELK3P41970 407 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 SERPINB4P48594 390 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 CACNA2D1P54289 1103 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 NCOA4Q13772 614 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 KBTBD12Q3ZCT8 623 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 CDHR3Q6ZTQ4 885 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 BBS12Q6ZW61 710 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 PDIK1LQ8N165 341 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 SLC44A1Q8WWI5 657 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 SLC38A10Q9HBR0 1119 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 CYP26B1Q9NR63 512 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 ZNF212Q9UDV6 495 aa13.59□□□□□ -0.23
PDZRN3-205ENST00000466780 SMAPO00193 183 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 CST3P01034 146 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 EDN1P05305 212 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 RFC1P35251 1148 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 RAP1GDS1P52306 607 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 RBBP5Q15291 538 aaKnown RBP13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 ZNF394Q53GI3 561 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 FAM182AQ5T1J6 154 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 GPAT2Q6NUI2 795 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 POLNQ7Z5Q5 900 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 KIAA0319LQ8IZA0 1049 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 RSAD2Q8WXG1 361 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 SCAF8Q9UPN6 1271 aaKnown RBP13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 IQANK1A0A1B0GTG1 560 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 CAPN14A8MX76 684 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 LSM8O95777 96 aaKnown RBP13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 PRKCEQ02156 737 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 SP4Q02446 784 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 TAZQ16635 292 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 ARHGEF16Q5VV41 709 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 CES4AQ5XG92 561 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 RSBN1LQ6PCB5 846 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 FAM71DQ8N9W8 422 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 TMEM35BQ8NCS4 154 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 TFAP2BQ92481 460 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 ATP6V0A1Q93050 837 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 ZNF184Q99676 751 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 TARS2Q9BW92 718 aaKnown RBP13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 PPP1R12CQ9BZL4 782 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 TJP2Q9UDY2 1190 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 POLIQ9UNA4 740 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 EFR3BQ9Y2G0 817 aa13.58□□□□□ -0.24
PDZRN3-205ENST00000466780 A8MXQ7 604 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 B2RBV5 119 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 KBTBD13C9JR72 458 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 MAP3K7O43318 606 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 LRCH4O75427 683 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 TSHRP16473 764 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 BASP1P80723 227 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 ZNF200P98182 395 aaPredicted RBP13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 PPFIBP2Q8ND30 876 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 JOSD2Q8TAC2 188 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 ZFAND2BQ8WV99 257 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 TMEM143Q96AN5 459 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 FAM161BQ96MY7 647 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 MAP3K20Q9NYL2 800 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 DOCK5Q9H7D0 1870 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 H3BRJ5 948 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 KLF11O14901 512 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 TBC1D12O60347 775 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 MAGEC1O60732 1142 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 FAM155BO75949 473 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 GSTA2P09210 222 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 KCNA2P16389 499 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 KDELR1P24390 212 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 PSMA2P25787 234 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 GCLCP48506 637 aaPredicted RBP13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 TAP1Q03518 808 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 MTERF2Q49AM1 385 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 PRPF39Q86UA1 669 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 CEP120Q8N960 986 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 MSTO1Q9BUK6 570 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 MECRQ9BV79 373 aa13.57□□□□□ -0.24
PDZRN3-205ENST00000466780 A0A0B4J269 797 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 MAGEA13PA6NCF6 341 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 H0YCG3 227 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 ASS1P00966 412 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 PIGRP01833 764 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 C1QAP02745 245 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 ENO1P06733 434 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 ERFP50548 548 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 DPYSL3Q14195 570 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 SYCP2LQ5T4T6 812 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 CCNJLQ8IV13 435 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 TTC13Q8NBP0 860 aa13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 RBM15BQ8NDT2 890 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-205ENST00000466780 CLPTM1LQ96KA5 538 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms