RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 SLC4A5Q9BY07 1137 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 METTL5Q9NRN9 209 aaKnown RBP12.79□□□□□ -0.36
VPS16-206ENST00000466415 TMLHEQ9NVH6 421 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 COG5Q9UP83 839 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 JRKLQ9Y4A0 524 aa12.79□□□□□ -0.36
VPS16-206ENST00000466415 MYO1FO00160 1098 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 SPOPO43791 374 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 BUB1BO60566 1050 aaPredicted RBP12.78□□□□□ -0.36
VPS16-206ENST00000466415 FGF18O76093 207 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 FTCDO95954 541 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 KRT3P12035 628 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 DESP17661 470 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 GRIK1P39086 918 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 DSG1Q02413 1049 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 CREMQ03060 361 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 ADIGQ0VDE8 80 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 MAMLD1Q13495 774 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 PEX26Q7Z412 305 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 LRRTM3Q86VH5 581 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 SCN4BQ8IWT1 228 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
VPS16-206ENST00000466415 VPS52Q8N1B4 723 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 FBXO22Q8NEZ5 403 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 C2orf15Q8WU43 125 aaKnown RBP12.78□□□□□ -0.36
VPS16-206ENST00000466415 CLP1Q92989 425 aaKnown RBP12.78□□□□□ -0.36
VPS16-206ENST00000466415 PGLYRP2Q96PD5 576 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 SMOQ99835 787 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 RHOBTB2Q9BYZ6 727 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 MTRRQ9UBK8 725 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 TJP2Q9UDY2 1190 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 AMFRQ9UKV5 643 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 SSX2IPQ9Y2D8 614 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 BACE2Q9Y5Z0 518 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 CDY1Q9Y6F8 540 aa12.78□□□□□ -0.36
VPS16-206ENST00000466415 KIAA1671Q9BY89 1806 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 LCHNA4D1U4 455 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 TRIM66O15016 1216 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 URI1O94763 535 aaPredicted RBP12.77□□□□□ -0.37
VPS16-206ENST00000466415 GJB6O95452 261 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 EFEMP2O95967 443 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 DNAJB2P25686 324 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 GPR17Q13304 367 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 CFAP221Q4G0U5 840 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 C9orf50Q5SZB4 431 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 RASIP1Q5U651 963 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 TMEM110Q86TL2 294 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.77□□□□□ -0.37
VPS16-206ENST00000466415 SPPL2BQ8TCT7 592 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 KCTD13Q8WZ19 329 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 MCRS1Q96EZ8 462 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 BTBD6Q96KE9 485 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 UBE2OQ9C0C9 1292 aaKnown RBP12.77□□□□□ -0.37
VPS16-206ENST00000466415 ABCB6Q9NP58 842 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.77□□□□□ -0.37
VPS16-206ENST00000466415 MRPL17Q9NRX2 175 aaKnown RBP12.77□□□□□ -0.37
VPS16-206ENST00000466415 CHST7Q9NS84 486 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 IP6K2Q9UHH9 426 aa12.77□□□□□ -0.37
VPS16-206ENST00000466415 MTMR11A4FU01 709 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 SIGLEC16A6NMB1 481 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 F8VP50 259 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 ENC1O14682 589 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 SART1O43290 800 aaKnown RBP12.76□□□□□ -0.37
VPS16-206ENST00000466415 BEST1O76090 585 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 FBXO21O94952 628 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 ATP1A1P05023 1023 aaKnown RBP12.76□□□□□ -0.37
VPS16-206ENST00000466415 CYP2F1P24903 491 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 PSMA2P25787 234 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 MAGEA11P43364 429 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 DNA2P51530 1060 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 TKTL1P51854 596 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 RABGGTBP53611 331 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 SLC6A3Q01959 620 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 RPS6KA1Q15418 735 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 SHHQ15465 462 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 PTPROQ16827 1216 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 MGAT5BQ3V5L5 792 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 VSTM1Q6UX27 236 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 LRRC57Q8N9N7 239 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 KLHL23Q8NBE8 558 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 GOLGA1Q92805 767 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 SEPT5Q99719 369 aaPredicted RBP12.76□□□□□ -0.37
VPS16-206ENST00000466415 UBXN6Q9BZV1 441 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 GOLPH3Q9H4A6 298 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 CSNK1G1Q9HCP0 422 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 PNPLA8Q9NP80 782 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 HYOU1Q9Y4L1 999 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 VWA8A3KMH1 1905 aa12.76□□□□□ -0.37
VPS16-206ENST00000466415 TCRBV5S1A1TA0A578 114 aa12.75□□□□□ -0.37
VPS16-206ENST00000466415 LINC01553A4QN01 128 aa12.75□□□□□ -0.37
VPS16-206ENST00000466415 TMEM191CA6NGB0 347 aa12.75□□□□□ -0.37
VPS16-206ENST00000466415 PAPSS1O43252 624 aaPredicted RBP12.75□□□□□ -0.37
VPS16-206ENST00000466415 NCK2O43639 380 aa12.75□□□□□ -0.37
VPS16-206ENST00000466415 TBC1D4O60343 1298 aa12.75□□□□□ -0.37
VPS16-206ENST00000466415 LPXNO60711 386 aa12.75□□□□□ -0.37
VPS16-206ENST00000466415 PROSCO94903 275 aa12.75□□□□□ -0.37
VPS16-206ENST00000466415 RPL17P18621 184 aaKnown RBP12.75□□□□□ -0.37
VPS16-206ENST00000466415 GPD1P21695 349 aa12.75□□□□□ -0.37
VPS16-206ENST00000466415 COMTP21964 271 aa12.75□□□□□ -0.37
VPS16-206ENST00000466415 OR1D2P34982 312 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms