RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ACOT1Q86TX2 421 aa23.18■■□□□ 1.3
LIME1-203ENST00000465591 ARL14EPQ8N8R7 260 aaPredicted RBP23.18■■□□□ 1.3
LIME1-203ENST00000465591 TAF4BQ92750 862 aa23.18■■□□□ 1.3
LIME1-203ENST00000465591 TIGD1Q96MW7 591 aa23.18■■□□□ 1.3
LIME1-203ENST00000465591 FAM83CQ9BQN1 747 aa23.18■■□□□ 1.3
LIME1-203ENST00000465591 TTLL2Q9BWV7 592 aa23.18■■□□□ 1.3
LIME1-203ENST00000465591 ELOVL4Q9GZR5 314 aa23.18■■□□□ 1.3
LIME1-203ENST00000465591 HPS4Q9NQG7 708 aa23.18■■□□□ 1.3
LIME1-203ENST00000465591 GKN1Q9NS71 199 aa23.18■■□□□ 1.3
LIME1-203ENST00000465591 RMND1Q9NWS8 449 aa23.18■■□□□ 1.3
LIME1-203ENST00000465591 R4GN57 208 aa23.18■■□□□ 1.3
LIME1-203ENST00000465591 OTOL1A6NHN0 477 aaPredicted RBP23.17■■□□□ 1.3
LIME1-203ENST00000465591 SPECC1L-ADORA2AF8WAN1 911 aa23.17■■□□□ 1.3
LIME1-203ENST00000465591 KRT13P13646 458 aa23.17■■□□□ 1.3
LIME1-203ENST00000465591 CTHP32929 405 aa23.17■■□□□ 1.3
LIME1-203ENST00000465591 NDST1P52848 882 aa23.17■■□□□ 1.3
LIME1-203ENST00000465591 MLLT6P55198 1093 aaPredicted RBP23.17■■□□□ 1.3
LIME1-203ENST00000465591 COBLL1Q53SF7 1204 aa23.17■■□□□ 1.3
LIME1-203ENST00000465591 FAM35AQ86V20 835 aa23.17■■□□□ 1.3
LIME1-203ENST00000465591 SMARCE1Q969G3 411 aa23.17■■□□□ 1.3
LIME1-203ENST00000465591 CEP295NLQ96MC4 621 aa23.17■■□□□ 1.3
LIME1-203ENST00000465591 KCNK16Q96T55 309 aa23.17■■□□□ 1.3
LIME1-203ENST00000465591 ATG2BQ96BY7 2078 aa23.17■■□□□ 1.3
LIME1-203ENST00000465591 PRR23AA6NEV1 266 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 NCAM2O15394 837 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 CHRNB1P11230 501 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 MAGEA9P43362 315 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 NOP14P78316 857 aaKnown RBP23.16■■□□□ 1.3
LIME1-203ENST00000465591 PLCB2Q00722 1185 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 ENPEPQ07075 957 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 MTAPQ13126 283 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 ZNF268Q14587 947 aaPredicted RBP23.16■■□□□ 1.3
LIME1-203ENST00000465591 ISM2Q6H9L7 571 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 FUKQ8N0W3 1084 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 CHFRQ96EP1 664 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 TWNKQ96RR1 684 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 CHRDQ9H2X0 955 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 C8orf33Q9H7E9 229 aaPredicted RBP23.16■■□□□ 1.3
LIME1-203ENST00000465591 KIF9Q9HAQ2 790 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 LMAN1LQ9HAT1 526 aa23.16■■□□□ 1.3
LIME1-203ENST00000465591 RBM12Q9NTZ6 932 aaKnown RBP23.16■■□□□ 1.3
LIME1-203ENST00000465591 EP300Q09472 2414 aaPredicted RBP23.16■■□□□ 1.3
LIME1-203ENST00000465591 TRAV19A0A0A6YYK7 116 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 TRIM49BA6NDI0 452 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 LAMTOR5O43504 91 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 SMC2O95347 1197 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 CKMP06732 381 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 P4HA1P13674 534 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 CCDC130P13994 396 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 ARSAP15289 507 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 ZXDBP98169 803 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 GAS6Q14393 721 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 ZNF77Q15935 545 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 ANKRD40Q6AI12 368 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 ZC3H3Q8IXZ2 948 aaKnown RBP23.15■■□□□ 1.3
LIME1-203ENST00000465591 ADSSL1Q8N142 457 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 SEMA4DQ92854 862 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 EBF3Q9H4W6 596 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 TMEM8AQ9HCN3 771 aa23.15■■□□□ 1.3
LIME1-203ENST00000465591 THG1LQ9NWX6 298 aaKnown RBP23.15■■□□□ 1.3
LIME1-203ENST00000465591 GVINP1Q7Z2Y8 2422 aa23.14■■□□□ 1.3
LIME1-203ENST00000465591 GPR179Q6PRD1 2367 aa23.14■■□□□ 1.3
LIME1-203ENST00000465591 ZNF840PA6NDX5 716 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 CETN3O15182 167 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 USP17L7P0C7H9 530 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 CD44P16070 742 aaKnown RBP23.14■■□□□ 1.29
LIME1-203ENST00000465591 IFRD2Q12894 506 aaPredicted RBP23.14■■□□□ 1.29
LIME1-203ENST00000465591 TAF10Q12962 218 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 USP4Q13107 963 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 ITPRIPL2Q3MIP1 535 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 TSSK4Q6SA08 328 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 RALGPS2Q86X27 583 aaPredicted RBP23.14■■□□□ 1.29
LIME1-203ENST00000465591 CRYBG2Q8N1P7 616 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 C12orf29Q8N999 325 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 ZMIZ2Q8NF64 920 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 NKD2Q969F2 451 aaPredicted RBP23.14■■□□□ 1.29
LIME1-203ENST00000465591 MSANTD3Q96H12 275 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 TNIP3Q96KP6 325 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 MED10Q9BTT4 135 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 MAN1B1Q9UKM7 699 aa23.14■■□□□ 1.29
LIME1-203ENST00000465591 BEST1O76090 585 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 HDCP19113 662 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 CSTF1Q05048 431 aaKnown RBP23.13■■□□□ 1.29
LIME1-203ENST00000465591 INCA1Q0VD86 236 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 MTF1Q14872 753 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 PON2Q15165 354 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 TTC16Q8NEE8 873 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 SCAMP5Q8TAC9 235 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 WHAMMQ8TF30 809 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 SMOQ99835 787 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 PRMT8Q9NR22 394 aaPredicted RBP23.13■■□□□ 1.29
LIME1-203ENST00000465591 KRT82Q9NSB4 513 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 FAM49BQ9NUQ9 324 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 TRPM5Q9NZQ8 1165 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 FBXO4Q9UKT5 387 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 CIZ1Q9ULV3 898 aaPredicted RBP23.13■■□□□ 1.29
LIME1-203ENST00000465591 OTOGLQ3ZCN5 2332 aa23.13■■□□□ 1.29
LIME1-203ENST00000465591 TNFRSF10BO14763 440 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 AP1G2O75843 785 aa23.12■■□□□ 1.29
LIME1-203ENST00000465591 EPB41P11171 864 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms