RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 INCA1Q0VD86 236 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 ORC1Q13415 861 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 ANGPT1Q15389 498 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 DCAF17Q5H9S7 520 aaPredicted RBP12.78□□□□□ -0.36
TMCO3-205ENST00000465556 KRT39Q6A163 491 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 ZNF852Q6ZMS4 543 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 RIN3Q8TB24 985 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 ATOH1Q92858 354 aaPredicted RBP12.78□□□□□ -0.36
TMCO3-205ENST00000465556 ZFYVE19Q96K21 471 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 APOBEC3GQ9HC16 384 aaKnown RBP12.78□□□□□ -0.36
TMCO3-205ENST00000465556 KRT82Q9NSB4 513 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 MRPS17Q9Y2R5 130 aaKnown RBP12.78□□□□□ -0.36
TMCO3-205ENST00000465556 MTF2Q9Y483 593 aaPredicted RBP12.78□□□□□ -0.36
TMCO3-205ENST00000465556 GVINP1Q7Z2Y8 2422 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 SPAG17Q6Q759 2223 aa12.77□□□□□ -0.36
TMCO3-205ENST00000465556 TRAV19A0A0A6YYK7 116 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 FAM170BA6NMN3 283 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 MAN2B1O00754 1011 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 CKMP06732 381 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 CCDC130P13994 396 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.37
TMCO3-205ENST00000465556 BMP6P22004 513 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 CCNE1P24864 410 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 PPP1R2P41236 205 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 MAGEA9P43362 315 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 MRE11P49959 708 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 UBE2HP62256 183 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 PLCB2Q00722 1185 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 USP4Q13107 963 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 ZNF268Q14587 947 aaPredicted RBP12.77□□□□□ -0.37
TMCO3-205ENST00000465556 TCERG1LQ5VWI1 586 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 ANKRD40Q6AI12 368 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 ISM2Q6H9L7 571 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 ACOT1Q86TX2 421 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 UNC93AQ86WB7 457 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 FUKQ8N0W3 1084 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 CCDC150Q8NCX0 1101 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 FBXL13Q8NEE6 735 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 CSGALNACT1Q8TDX6 532 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 SMARCD1Q96GM5 515 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 MSANTD3Q96H12 275 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 SLC22A12Q96S37 553 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 MED10Q9BTT4 135 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 CYP3A43Q9HB55 503 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 DMAP1Q9NPF5 467 aaPredicted RBP12.77□□□□□ -0.37
TMCO3-205ENST00000465556 FAM49BQ9NUQ9 324 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 TDP1Q9NUW8 608 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 EHD2Q9NZN4 543 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 NDRG2Q9UN36 371 aaKnown RBP12.77□□□□□ -0.37
TMCO3-205ENST00000465556 PTPRZ1P23471 2315 aaPredicted RBP12.77□□□□□ -0.37
TMCO3-205ENST00000465556 OTOGLQ3ZCN5 2332 aa12.77□□□□□ -0.37
TMCO3-205ENST00000465556 C2orf78A6NCI8 922 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 STX10O60499 249 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 AP1G2O75843 785 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 CTHP32929 405 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 SOX9P48436 509 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 MLLT6P55198 1093 aaPredicted RBP12.76□□□□□ -0.37
TMCO3-205ENST00000465556 IFRD2Q12894 506 aaPredicted RBP12.76□□□□□ -0.37
TMCO3-205ENST00000465556 MORC3Q14149 939 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 CBWD6Q4V339 395 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 CBWD3Q5JTY5 395 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 CBWD5Q5RIA9 395 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 KLHL10Q6JEL2 608 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 PAQR9Q6ZVX9 377 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 ZNF687Q8N1G0 1237 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 SEMA4DQ92854 862 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 CLDN23Q96B33 292 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 DHTKD1Q96HY7 919 aaPredicted RBP12.76□□□□□ -0.37
TMCO3-205ENST00000465556 TWNKQ96RR1 684 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 NELL2Q99435 816 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 C8orf33Q9H7E9 229 aaPredicted RBP12.76□□□□□ -0.37
TMCO3-205ENST00000465556 THG1LQ9NWX6 298 aaKnown RBP12.76□□□□□ -0.37
TMCO3-205ENST00000465556 GTSE1Q9NYZ3 720 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 TRPM5Q9NZQ8 1165 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 GCNT4Q9P109 453 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 ARMCX3Q9UH62 379 aaPredicted RBP12.76□□□□□ -0.37
TMCO3-205ENST00000465556 CTNND2Q9UQB3 1225 aa12.76□□□□□ -0.37
TMCO3-205ENST00000465556 EP300Q09472 2414 aaPredicted RBP12.76□□□□□ -0.37
TMCO3-205ENST00000465556 WDR87Q6ZQQ6 2873 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 BIN1O00499 593 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 NCAM2O15394 837 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 CILPO75339 1184 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 RTN3O95197 1032 aaPredicted RBP12.75□□□□□ -0.37
TMCO3-205ENST00000465556 USP17L7P0C7H9 530 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 PFKLP17858 780 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 CD58P19256 250 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 TRIM21P19474 475 aaKnown RBP12.75□□□□□ -0.37
TMCO3-205ENST00000465556 NBL1P41271 181 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 RPS9P46781 194 aaKnown RBP12.75□□□□□ -0.37
TMCO3-205ENST00000465556 PDE6CP51160 858 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 KPNA1P52294 538 aaPredicted RBP12.75□□□□□ -0.37
TMCO3-205ENST00000465556 SLC5A3P53794 718 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 EML5Q05BV3 1969 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 TNK2Q07912 1038 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 MTF1Q14872 753 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 ZNF77Q15935 545 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 TTI2Q6NXR4 508 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 C1orf228Q6PIY5 440 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 FOXR2Q6PJQ5 311 aa12.75□□□□□ -0.37
TMCO3-205ENST00000465556 ALYREFQ86V81 257 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms