RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 FBXL13Q8NEE6 735 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 PYROXD1Q8WU10 500 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 NKD2Q969F2 451 aaPredicted RBP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 SKA1Q96BD8 255 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 MTBPQ96DY7 904 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 HIC2Q96JB3 615 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 C9orf72Q96LT7 481 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 C7orf26Q96N11 449 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 BTBD9Q96Q07 612 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 FNBP1Q96RU3 617 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 HAPLN3Q96S86 360 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 ECSITQ9BQ95 431 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 STRA6Q9BX79 667 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 SPATA16Q9BXB7 569 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 ACSS3Q9H6R3 686 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 C17orf75Q9HAS0 396 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 PARVAQ9NVD7 372 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 IRAK4Q9NWZ3 460 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 PLK2Q9NYY3 685 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 SCHIP1Q9P0W5 487 aaPredicted RBP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 HEY2Q9UBP5 337 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 TAGLN3Q9UI15 199 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 ITGB1BP2Q9UKP3 347 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 HCN2Q9UL51 889 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 ZNF148Q9UQR1 794 aa7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 MYH14Q7Z406 1995 aaKnown RBP7.53□□□□□ -1.2
CLSTN1-204ENST00000464286 CLUHO75153 1309 aa7.52□□□□□ -1.2
CLSTN1-204ENST00000464286 QSER1Q2KHR3 1735 aa7.52□□□□□ -1.2
CLSTN1-204ENST00000464286 TAF1P21675 1872 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 A0A0G2JND7 137 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 A0A1W2PNR3 127 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 RSPH10B2B2RC85 870 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 USP17L15C9J2P7 530 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 USP17L13C9JLJ4 530 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 USP17L11C9JVI0 530 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 USP17L18D6R9N7 530 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 USP17L22D6RA61 530 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 USP17L17D6RBQ6 530 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 USP17L19D6RCP7 530 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 USP17L20D6RJB6 530 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 MEIS2O14770 477 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 CYP26A1O43174 497 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 PEX1O43933 1283 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 LPXNO60711 386 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 BBOX1O75936 387 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 KRT37O76014 449 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 TM7SF2O76062 418 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 SLITRK3O94933 977 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 SGPL1O95470 568 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 CBX6O95503 412 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 CALB1P05937 261 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 RSPH10BP0C881 870 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 RARBP10826 455 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 PIM1P11309 404 aaPredicted RBP7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 MYL4P12829 197 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 EEF2P13639 858 aaKnown RBP7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 ANPEPP15144 967 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 CREB1P16220 341 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 CHRNB2P17787 502 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 KRT4P19013 534 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 RRM1P23921 792 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 KLRK1P26718 216 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 RPA3P35244 121 aaPredicted RBP7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 ARSEP51690 589 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 EPHA4P54764 986 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 SESN3P58005 492 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 INHBEP58166 350 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 ACTR3P61158 418 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 CYP4A11Q02928 519 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 USP17L24Q0WX57 530 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 LSAMPQ13449 338 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 R3HDM1Q15032 1099 aaKnown RBP7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 DLGAP5Q15398 846 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 MFSD14BQ5SR56 506 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 PCNX4Q63HM2 1172 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 AADACL2Q6P093 401 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 FIGNL1Q6PIW4 674 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 USP17L6PQ6QN14 398 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 POTEAQ6S8J7 498 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 C4orf22Q6V702 233 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 TMEM179Q6ZVK1 233 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 OTOP1Q7RTM1 612 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 NIPA1Q7RTP0 329 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 LRRC6Q86X45 466 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 TMEM126BQ8IUX1 230 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 SCUBE1Q8IWY4 988 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 PALM2Q8IXS6 379 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 MCOLN2Q8IZK6 566 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 ZDHHC14Q8IZN3 488 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 SAMD3Q8N6K7 520 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 ALLCQ8N6M5 410 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 GALNT6Q8NCL4 622 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 TTC8Q8TAM2 541 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 DDI1Q8WTU0 396 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 RPGRQ92834 1020 aaKnown RBP7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 LENG9Q96B70 501 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 OXNAD1Q96HP4 312 aaPredicted RBP7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 RBM17Q96I25 401 aaKnown RBP7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 APOPT1Q96IL0 206 aa7.52□□□□□ -1.21
CLSTN1-204ENST00000464286 CATSPER2Q96P56 530 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms