RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SHDQ96IW2 340 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 ARID3AQ99856 593 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 IMPG2Q9BZV3 1241 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 NIF3L1Q9GZT8 377 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 TRPV5Q9NQA5 729 aa13.79□□□□□ -0.2
XRN1-203ENST00000463916 ANAPC1Q9H1A4 1944 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 RFX1P22670 979 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 ANXA13P27216 316 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 AVPR1AP37288 418 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 FILIP1Q7Z7B0 1213 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 UNC93AQ86WB7 457 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 CCDC105Q8IYK2 499 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 SLC2A14Q8TDB8 520 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 MED15Q96RN5 788 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 TTLL2Q9BWV7 592 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 TRPC7Q9HCX4 862 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 FAM49BQ9NUQ9 324 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 FAM170BA6NMN3 283 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 DPYSL4O14531 572 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 CHADO15335 359 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 DDX6P26196 483 aaKnown RBP eCLIP13.78□□□□□ -0.2
XRN1-203ENST00000463916 TNK2Q07912 1038 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 FZD5Q13467 585 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 UBXN2BQ14CS0 331 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 CLEC17AQ6ZS10 378 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 YAF2Q8IY57 180 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 ZNF687Q8N1G0 1237 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 CELF5Q8N6W0 485 aaKnown RBP13.78□□□□□ -0.2
XRN1-203ENST00000463916 ARL14EPQ8N8R7 260 aaPredicted RBP13.78□□□□□ -0.2
XRN1-203ENST00000463916 DTWD2Q8NBA8 298 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 ZMIZ2Q8NF64 920 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 SCAMP5Q8TAC9 235 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 TTC8Q8TAM2 541 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 BPIFB1Q8TDL5 484 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 CEP295NLQ96MC4 621 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 PRRX2Q99811 253 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 SMOQ99835 787 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 MED10Q9BTT4 135 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 CYP3A43Q9HB55 503 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 LTB4R2Q9NPC1 389 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 TDP1Q9NUW8 608 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 OBP2AQ9NY56 170 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 GTSE1Q9NYZ3 720 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 GCNT4Q9P109 453 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 COQ4Q9Y3A0 265 aa13.78□□□□□ -0.2
XRN1-203ENST00000463916 ZNF638Q14966 1978 aaKnown RBP13.77□□□□□ -0.2
XRN1-203ENST00000463916 TNFRSF10BO14763 440 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 STX10O60499 249 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 CILPO75339 1184 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 TARSP26639 723 aaKnown RBP13.77□□□□□ -0.21
XRN1-203ENST00000463916 PPP1R2P41236 205 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 SOX9P48436 509 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 NUBP1P53384 320 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 PTPN5P54829 565 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 ZXDBP98169 803 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 IFRD2Q12894 506 aaPredicted RBP13.77□□□□□ -0.21
XRN1-203ENST00000463916 TAF10Q12962 218 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 ZNF394Q53GI3 561 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 FRMD5Q7Z6J6 570 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 CEP63Q96MT8 703 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 KRT82Q9NSB4 513 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 FAM86C1Q9NVL1 165 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 ZMYM5Q9UJ78 669 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 PIAS3Q9Y6X2 628 aa13.77□□□□□ -0.21
XRN1-203ENST00000463916 ZNF840PA6NDX5 716 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 AP1G2O75843 785 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 PAK1Q13153 545 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 NUP93Q8N1F7 819 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 CCDC150Q8NCX0 1101 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 SMARCD1Q96GM5 515 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 NT5C1AQ9BXI3 368 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 RNF38Q9H0F5 515 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 CSNK1G1Q9HCP0 422 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 LMBRD1Q9NUN5 540 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 OTOL1A6NHN0 477 aaPredicted RBP13.76□□□□□ -0.21
XRN1-203ENST00000463916 SOBPA7XYQ1 873 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 HDCP19113 662 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 ADORA2BP29275 332 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 PGFP49763 221 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 MAP3K7CLP57077 242 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 TRIM68Q6AZZ1 485 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 FOXR2Q6PJQ5 311 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 ZNF852Q6ZMS4 543 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 TRIML1Q8N9V2 468 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 CYFIP2Q96F07 1278 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 FAM83CQ9BQN1 747 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 METTL14Q9HCE5 456 aaKnown RBP13.76□□□□□ -0.21
XRN1-203ENST00000463916 DMAP1Q9NPF5 467 aaPredicted RBP13.76□□□□□ -0.21
XRN1-203ENST00000463916 GKN1Q9NS71 199 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 CISHQ9NSE2 258 aa13.76□□□□□ -0.21
XRN1-203ENST00000463916 CHORDC1Q9UHD1 332 aaPredicted RBP13.76□□□□□ -0.21
XRN1-203ENST00000463916 TRAV19A0A0A6YYK7 116 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 BICDL2A1A5D9 508 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 CKMP06732 381 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 FMO5P49326 533 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 SLC5A3P53794 718 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 CCDC40Q4G0X9 1142 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 ARHGAP29Q52LW3 1261 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 TXNDC11Q6PKC3 985 aa13.75□□□□□ -0.21
XRN1-203ENST00000463916 TTC16Q8NEE8 873 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms