RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 PON1P27169 355 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 VIPR2P41587 438 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 ZNF132P52740 706 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 VWA3BQ502W6 1294 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 ARHGAP17Q68EM7 881 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 TRIM65Q6PJ69 517 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 CLEC20AQ6ZU45 233 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 ELSPBP1Q96BH3 223 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 KXD1Q9BQD3 176 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 ZSWIM1Q9BR11 485 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 MED10Q9BTT4 135 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 TASP1Q9H6P5 420 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 SIX2Q9NPC8 291 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 DMAP1Q9NPF5 467 aaPredicted RBP18.76■□□□□ 0.59
VPS52-214ENST00000463486 KRT82Q9NSB4 513 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 GCNT4Q9P109 453 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 OBSL1O75147 1896 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 ZDBF2Q9HCK1 2354 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 SOBPA7XYQ1 873 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 ZNF18P17022 549 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 SIGLEC14Q08ET2 396 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 TAF12Q16514 161 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 GPR158Q5T848 1215 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 GJB7Q6PEY0 223 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 GBP6Q6ZN66 633 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 MON1AQ86VX9 555 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 ARID3BQ8IVW6 561 aaPredicted RBP18.75■□□□□ 0.59
VPS52-214ENST00000463486 NUP93Q8N1F7 819 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 PPM1KQ8N3J5 372 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 SCAMP5Q8TAC9 235 aa18.75■□□□□ 0.59
VPS52-214ENST00000463486 HEXIM2Q96MH2 286 aaKnown RBP18.75■□□□□ 0.59
VPS52-214ENST00000463486 ATP8B3O60423 1300 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 FAM86C2PA6NEL3 165 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 PRAMEF12O95522 483 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 SRFP11831 508 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 ANXA13P27216 316 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 ADORA2BP29275 332 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 MAP3K7CLP57077 242 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 GPC5P78333 572 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 MYL5Q02045 173 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 KCNMA1Q12791 1236 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 ANO6Q4KMQ2 910 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 TXNDC8Q6A555 127 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 APTXQ7Z2E3 356 aaKnown RBP18.74■□□□□ 0.59
VPS52-214ENST00000463486 GPRIN1Q7Z2K8 1008 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 GPIHBP1Q8IV16 184 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 TFAP2BQ92481 460 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 JAKMIP2Q96AA8 810 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 SLC22A12Q96S37 553 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 C1QTNF1Q9BXJ1 281 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 DUSP16Q9BY84 665 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 ZFP14Q9HCL3 533 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 SLC2A4RGQ9NR83 387 aa18.74■□□□□ 0.59
VPS52-214ENST00000463486 UXTQ9UBK9 157 aaPredicted RBP18.74■□□□□ 0.59
VPS52-214ENST00000463486 ZNF638Q14966 1978 aaKnown RBP18.73■□□□□ 0.59
VPS52-214ENST00000463486 ANAPC1Q9H1A4 1944 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 ZNF840PA6NDX5 716 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 LRRC10BA6NIK2 292 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 CALCAP01258 141 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 FAM200BP0CF97 657 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 SLC5A3P53794 718 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 YWHAEP62258 255 aaKnown RBP18.73■□□□□ 0.59
VPS52-214ENST00000463486 TAF10Q12962 218 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 KRT31Q15323 416 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 EXOC3L4Q17RC7 722 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 IER5LQ5T953 404 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 TMEM270Q6UE05 265 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 VITQ6UXI7 678 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 TTC30AQ86WT1 665 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 CMTM8Q8IZV2 173 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 BPIFA3Q9BQP9 254 aa18.73■□□□□ 0.59
VPS52-214ENST00000463486 UBE2TQ9NPD8 197 aaPredicted RBP18.73■□□□□ 0.59
VPS52-214ENST00000463486 AJAP1Q9UKB5 411 aaPredicted RBP18.73■□□□□ 0.59
VPS52-214ENST00000463486 C2orf78A6NCI8 922 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 TMEM221A6NGB7 291 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 M0R296 226 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 O00370 1275 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 PAEPP09466 180 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 ZDHHC11BP0C7U3 371 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 PRKCSHP14314 528 aaPredicted RBP18.72■□□□□ 0.59
VPS52-214ENST00000463486 NPR3P17342 541 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 DDX6P26196 483 aaKnown RBP eCLIP18.72■□□□□ 0.59
VPS52-214ENST00000463486 YWHAQP27348 245 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 PGFP49763 221 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 PKDCCQ504Y2 493 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 ARHGAP15Q53QZ3 475 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 BMP8AQ7Z5Y6 402 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 MFSD6LQ8IWD5 586 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 DHX40Q8IX18 779 aaKnown RBP18.72■□□□□ 0.59
VPS52-214ENST00000463486 MAB21L3Q8N8X9 362 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 ANKRD52Q8NB46 1076 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 RIN3Q8TB24 985 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 GCNAQ96QF7 691 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 CYP2S1Q96SQ9 504 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 LRFN3Q9BTN0 628 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 UBXN6Q9BZV1 441 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 SMG9Q9H0W8 520 aaKnown RBP18.72■□□□□ 0.59
VPS52-214ENST00000463486 SLITRK6Q9H5Y7 841 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 PNPLA8Q9NP80 782 aa18.72■□□□□ 0.59
VPS52-214ENST00000463486 COMMD8Q9NX08 183 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms