RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 SNX9Q9Y5X1 595 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 TNRC6BQ9UPQ9 1833 aaKnown RBP16.81■□□□□ 0.28
SND1-203ENST00000463020 CACNA1EQ15878 2313 aa16.81■□□□□ 0.28
SND1-203ENST00000463020 ANKRD11Q6UB99 2663 aaPredicted RBP16.81■□□□□ 0.28
SND1-203ENST00000463020 MYMKA6NI61 221 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 SGK1O00141 431 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 LEFTY2O00292 366 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 KHNYNO15037 678 aaKnown RBP16.8■□□□□ 0.28
SND1-203ENST00000463020 SLC26A4O43511 780 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 DDIT3P35638 169 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 DHPSP49366 369 aaPredicted RBP16.8■□□□□ 0.28
SND1-203ENST00000463020 CACNA2D1P54289 1103 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 CRY1Q16526 586 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 CFAP221Q4G0U5 840 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 FAM171BQ6P995 826 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 LIMS2Q7Z4I7 341 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 FILIP1Q7Z7B0 1213 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 SPATA2LQ8IUW3 424 aaPredicted RBP16.8■□□□□ 0.28
SND1-203ENST00000463020 CSGALNACT2Q8N6G5 542 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 ALLCQ8N6M5 410 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 OR5B17Q8NGF7 314 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 PIGKQ92643 395 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 MYLPFQ96A32 169 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 DNAJC19Q96DA6 116 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 GDAP2Q9NXN4 497 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 RBAKQ9NYW8 714 aaPredicted RBP16.8■□□□□ 0.28
SND1-203ENST00000463020 UXTQ9UBK9 157 aaPredicted RBP16.8■□□□□ 0.28
SND1-203ENST00000463020 MMP17Q9ULZ9 603 aa16.8■□□□□ 0.28
SND1-203ENST00000463020 ASCC3Q8N3C0 2202 aaKnown RBP16.8■□□□□ 0.28
SND1-203ENST00000463020 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 SRRM3A6NNA2 597 aaPredicted RBP16.79■□□□□ 0.28
SND1-203ENST00000463020 HYAL3O43820 417 aaPredicted RBP16.79■□□□□ 0.28
SND1-203ENST00000463020 HUS1O60921 280 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 ADAM23O75077 832 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 TCF3P15923 654 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 HDCP19113 662 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 DEKP35659 375 aaKnown RBP16.79■□□□□ 0.28
SND1-203ENST00000463020 PNPLA4P41247 253 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 USP39Q53GS9 565 aaKnown RBP16.79■□□□□ 0.28
SND1-203ENST00000463020 L1TD1Q5T7N2 865 aaKnown RBP16.79■□□□□ 0.28
SND1-203ENST00000463020 DAB2IPQ5VWQ8 1189 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 TMEFF1Q8IYR6 380 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 IL17RCQ8NAC3 791 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 GLIS3Q8NEA6 775 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 TMX3Q96JJ7 454 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 PCIF1Q9H4Z3 704 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 SMPD4Q9NXE4 827 aa16.79■□□□□ 0.28
SND1-203ENST00000463020 SPAARA0A1B0GVQ0 90 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 KLF8O95600 359 aaPredicted RBP16.78■□□□□ 0.28
SND1-203ENST00000463020 KRT19P08727 400 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 CEACAM1P13688 526 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 CSRP1P21291 193 aaKnown RBP16.78■□□□□ 0.28
SND1-203ENST00000463020 BDNFP23560 247 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 LONP1P36776 959 aaKnown RBP16.78■□□□□ 0.28
SND1-203ENST00000463020 MAPK8P45983 427 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 MYL7Q01449 175 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 POU5F1Q01860 360 aaKnown RBP16.78■□□□□ 0.28
SND1-203ENST00000463020 KCNB1Q14721 858 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 SF3A1Q15459 793 aaKnown RBP16.78■□□□□ 0.28
SND1-203ENST00000463020 NT5DC4Q86YG4 428 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 TMEM86AQ8N2M4 240 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 TOP6BLQ8N6T0 577 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 LRRC52Q8N7C0 313 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 TXNDC5Q8NBS9 432 aaKnown RBP16.78■□□□□ 0.28
SND1-203ENST00000463020 RASSF8Q8NHQ8 419 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 SYT15Q9BQS2 421 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 MRPL44Q9H9J2 332 aaKnown RBP16.78■□□□□ 0.28
SND1-203ENST00000463020 KLK13Q9UKR3 277 aa16.78■□□□□ 0.28
SND1-203ENST00000463020 H3BQV1 296 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 NFATC1O95644 943 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 PDGFRBP09619 1106 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 TIE1P35590 1138 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 P2RY2P41231 377 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 MAGEA11P43364 429 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 FAM193AP78312 1265 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 KDSRQ06136 332 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 DHCR24Q15392 516 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 TRIM61Q5EBN2 209 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 ADGRG2Q8IZP9 1017 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 PHTF2Q8N3S3 785 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 KRI1Q8N9T8 703 aaKnown RBP16.77■□□□□ 0.28
SND1-203ENST00000463020 OR2I1PQ8NGU4 316 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 NOC3LQ8WTT2 800 aaKnown RBP16.77■□□□□ 0.28
SND1-203ENST00000463020 HVCN1Q96D96 273 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 CLIC6Q96NY7 704 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 CHMP5Q9NZZ3 219 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 ITGA11Q9UKX5 1188 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 HCN2Q9UL51 889 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 CIZ1Q9ULV3 898 aaPredicted RBP16.77■□□□□ 0.28
SND1-203ENST00000463020 CPQQ9Y646 472 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 CLIC4Q9Y696 253 aa16.77■□□□□ 0.28
SND1-203ENST00000463020 FASNP49327 2511 aaKnown RBP16.76■□□□□ 0.27
SND1-203ENST00000463020 A0A087X0B3 334 aa16.76■□□□□ 0.27
SND1-203ENST00000463020 ZNF840PA6NDX5 716 aa16.76■□□□□ 0.27
SND1-203ENST00000463020 KIR2DL1P43626 348 aaPredicted RBP16.76■□□□□ 0.27
SND1-203ENST00000463020 RABEP1Q15276 862 aa16.76■□□□□ 0.27
SND1-203ENST00000463020 MAP7D1Q3KQU3 841 aa16.76■□□□□ 0.27
SND1-203ENST00000463020 RHBDF2Q6PJF5 856 aa16.76■□□□□ 0.27
SND1-203ENST00000463020 DEFB119Q8N690 84 aa16.76■□□□□ 0.27
SND1-203ENST00000463020 WBP2Q969T9 261 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms