RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	KRT5	P13647	590 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	PTMS	P20962	102 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	USP8	P40818	1118 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	USP46	P62068	366 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	SIGLEC14	Q08ET2	396 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	MAN2A1	Q16706	1144 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	GOLGA7B	Q2TAP0	167 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	TXNDC8	Q6A555	127 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	POTEH	Q6S545	545 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	TMEM270	Q6UE05	265 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	GBP6	Q6ZN66	633 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	WHAMM	Q8TF30	809 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	KAT5	Q92993	513 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	FBXO32	Q969P5	355 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	NXPE3	Q969Y0	559 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	FAM122A	Q96E09	287 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	TMEM176A	Q96HP8	235 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	SPATA17	Q96L03	361 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	C8orf48	Q96LL4	319 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	ASB16	Q96NS5	453 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	TUBGCP2	Q9BSJ2	902 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	PLA2G2F	Q9BZM2	168 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	GPR88	Q9GZN0	384 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	TASP1	Q9H6P5	420 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	IL21	Q9HBE4	155 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	UBE2T	Q9NPD8	197 aa	Predicted RBP	10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	TMEM30A	Q9NV96	361 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	TRPM5	Q9NZQ8	1165 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	CA14	Q9ULX7	337 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	TICRR	Q7Z2Z1	1910 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	PATJ	Q8NI35	1801 aa		10.19	□□□□□ -0.78
PSMD4-208	ENST00000462970	ZDBF2	Q9HCK1	2354 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	HELZ	P42694	1942 aa	Known RBP	10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	RTN3	O95197	1032 aa	Predicted RBP	10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	CALCA	P01258	141 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	F11	P03951	625 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	CKM	P06732	381 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	SRF	P11831	508 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	SLC9A1	P19634	815 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	CDK11B	P21127	795 aa	Known RBP	10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	YWHAQ	P27348	245 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	AVPR1A	P37288	418 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	PLA2G5	P39877	138 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	RAD23B	P54727	409 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	GPC5	P78333	572 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	MYL5	Q02045	173 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	APBA1	Q02410	837 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	TAF10	Q12962	218 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	ARHGAP44	Q17R89	818 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	EXOC3L4	Q17RC7	722 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	ANO6	Q4KMQ2	910 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	VWA3B	Q502W6	1294 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	SGO2	Q562F6	1265 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	CT47A1	Q5JQC4	288 aa	Predicted RBP	10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	GJB7	Q6PEY0	223 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	PAQR9	Q6ZVX9	377 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	SIX5	Q8N196	739 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	NUP93	Q8N1F7	819 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	AOPEP	Q8N6M6	819 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	SLC4A11	Q8NBS3	891 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	ANKRD20A12P	Q8NF67	263 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	SCAMP5	Q8TAC9	235 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	ENOX1	Q8TC92	643 aa	Known RBP	10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	PBXIP1	Q96AQ6	731 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	ELSPBP1	Q96BH3	223 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	TRMT2B	Q96GJ1	504 aa	Known RBP	10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	SLITRK1	Q96PX8	696 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	HNRNPAB	Q99729	332 aa	Known RBP	10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	SMO	Q99835	787 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	SLC46A2	Q9BY10	475 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	NAT10	Q9H0A0	1025 aa	Known RBP	10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	VPS16	Q9H269	839 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	NDST4	Q9H3R1	872 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	BRD9	Q9H8M2	597 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	FANCL	Q9NW38	375 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	EHD2	Q9NZN4	543 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	DUSP12	Q9UNI6	340 aa		10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.18	□□□□□ -0.78
PSMD4-208	ENST00000462970	TRAV19	A0A0A6YYK7	116 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	SYCE3	A1L190	88 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	C2orf78	A6NCI8	922 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	HEPACAM2	A8MVW5	462 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	PMM2	O15305	246 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	ECI2	O75521	394 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	BEST1	O76090	585 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	PRAMEF12	O95522	483 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	PDGFB	P01127	241 aa	Predicted RBP	10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	FCAR	P24071	287 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	EEF1G	P26641	437 aa	Known RBP	10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	GDI1	P31150	447 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	SLC5A3	P53794	718 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	MFAP3	P55082	362 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	SLC8A3	P57103	927 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	KLHL40	Q2TBA0	621 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	TCP11X2	Q5H9J9	407 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	TRIM65	Q6PJ69	517 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	VIT	Q6UXI7	678 aa		10.17	□□□□□ -0.78
PSMD4-208	ENST00000462970	TMEM150A	Q86TG1	271 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms