RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 TAP2Q03519 686 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 FOXO1Q12778 655 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 MYO1EQ12965 1108 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 DYRK1AQ13627 763 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 NPY5RQ15761 445 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 SLC5A9Q2M3M2 681 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 ZNF750Q32MQ0 723 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 CD300EQ496F6 205 aaPredicted RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 ATPAF1Q5TC12 328 aaPredicted RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 C1QL3Q5VWW1 255 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 RAP1GAP2Q684P5 730 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 SPTY2D1Q68D10 685 aaPredicted RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 NAIF1Q69YI7 327 aaPredicted RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 RASGRP3Q8IV61 690 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 TEX19Q8NA77 164 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 ZNF483Q8TF39 744 aaPredicted RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 ZNF384Q8TF68 577 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 ATRIPQ8WXE1 791 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 LRIG1Q96JA1 1093 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 ADOQ96SZ5 270 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 NELL2Q99435 816 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 GDF15Q99988 308 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 KATNAL1Q9BW62 490 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 DEF6Q9H4E7 631 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 EPS8L2Q9H6S3 715 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 CXorf36Q9H7Y0 433 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 AS3MTQ9HBK9 375 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 GBA2Q9HCG7 927 aaPredicted RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 CASS4Q9NQ75 786 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 CTTNBP2NLQ9P2B4 639 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 DNMT3BQ9UBC3 853 aaKnown RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 DNAJB11Q9UBS4 358 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 HERC5Q9UII4 1024 aaKnown RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 KCNE5Q9UJ90 142 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 NDRG4Q9ULP0 352 aaKnown RBP3.68□□□□□ -1.82
VCL-203ENST00000461383 TCAF1Q9Y4C2 921 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.68□□□□□ -1.82
VCL-203ENST00000461383 FPGT-TNNI3KV9GXZ4 949 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 XDHP47989 1333 aa3.68□□□□□ -1.82
VCL-203ENST00000461383 KAT6AQ92794 2004 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 FER1L4A9Z1Z3 1794 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 A0A0B4J269 797 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 IPO5O00410 1097 aaKnown RBP3.67□□□□□ -1.82
VCL-203ENST00000461383 RNASET2O00584 256 aaKnown RBP3.67□□□□□ -1.82
VCL-203ENST00000461383 ZSCAN9O15535 394 aaPredicted RBP3.67□□□□□ -1.82
VCL-203ENST00000461383 HGFP14210 728 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 PPIFP30405 207 aaKnown RBP3.67□□□□□ -1.82
VCL-203ENST00000461383 AKT1P31749 480 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 PDE6CP51160 858 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 PGDP52209 483 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 CXADRP78310 365 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 TUBB3Q13509 450 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 CCNIQ14094 377 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 RRP1BQ14684 758 aaKnown RBP3.67□□□□□ -1.82
VCL-203ENST00000461383 HLXQ14774 488 aaPredicted RBP3.67□□□□□ -1.82
VCL-203ENST00000461383 SLC4A8Q2Y0W8 1093 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 P3H1Q32P28 736 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 PTCHD3Q3KNS1 767 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 RBM20Q5T481 1227 aaKnown RBP3.67□□□□□ -1.82
VCL-203ENST00000461383 CERCAMQ5T4B2 595 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 TMTC4Q5T4D3 741 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 ICE2Q659A1 982 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 JMJD6Q6NYC1 403 aaPredicted RBP3.67□□□□□ -1.82
VCL-203ENST00000461383 MAMDC4Q6UXC1 1216 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 KIAA0408Q6ZU52 694 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 MICALCLQ6ZW33 695 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 HTR3DQ70Z44 454 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 COLGALT2Q8IYK4 626 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 NRSN1Q8IZ57 195 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 ADGRG5Q8IZF4 528 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.67□□□□□ -1.82
VCL-203ENST00000461383 CHST13Q8NET6 341 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 Q8TCH9 128 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 ABHD5Q8WTS1 349 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 TMEM171Q8WVE6 324 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 LOXL4Q96JB6 756 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 TBATAQ96M53 351 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 HIST1H2AAQ96QV6 131 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 ALOXE3Q9BYJ1 711 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 TPSD1Q9BZJ3 242 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 BRD8Q9H0E9 1235 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 TMEM8AQ9HCN3 771 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 SEPSECSQ9HD40 501 aaKnown RBP3.67□□□□□ -1.82
VCL-203ENST00000461383 SAYSD1Q9NPB0 183 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 HELLSQ9NRZ9 838 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 KIF17Q9P2E2 1029 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 SERTAD3Q9UJW9 196 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 PNMA2Q9UL42 364 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 CA14Q9ULX7 337 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 CAPN11Q9UMQ6 739 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 LRRFIP2Q9Y608 721 aaKnown RBP3.67□□□□□ -1.82
VCL-203ENST00000461383 HS3ST4Q9Y661 456 aa3.67□□□□□ -1.82
VCL-203ENST00000461383 TRGV11A0A075B6L2 103 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 A0A1W2PS29 197 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 CCDC78A2IDD5 438 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 PATE3B3GLJ2 98 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 EIF3FO00303 357 aaPredicted RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 CD3EAPO15446 510 aaKnown RBP3.66□□□□□ -1.82
VCL-203ENST00000461383 DNPH1O43598 174 aa3.66□□□□□ -1.82
VCL-203ENST00000461383 PRICKLE3O43900 615 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms