RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 PRAMEF19Q5SWL8 479 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 EXOC8Q8IYI6 725 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 KIAA0319LQ8IZA0 1049 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 C12orf29Q8N999 325 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 SYT15Q9BQS2 421 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 TMEM165Q9HC07 324 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 FGFR1OP2Q9NVK5 253 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 ADAMTS5Q9UNA0 930 aa16.14■□□□□ 0.17
LMNB1-203ENST00000460265 CCL15-CCL14A0A0B4J2E2 113 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 TTC4O95801 387 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 AGTP01019 485 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 TUBP50607 506 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 COPS2P61201 443 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 SNAPC2Q13487 334 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 CCL15Q16663 113 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 FAXCQ5TGI0 409 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 ACOT1Q86TX2 421 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 EIF1ADQ8N9N8 165 aaKnown RBP16.13■□□□□ 0.17
LMNB1-203ENST00000460265 FAM71DQ8N9W8 422 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 FGD4Q96M96 766 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 TRIM33Q9UPN9 1127 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 MCF2LO15068 1137 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 PSTPIP1O43586 416 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 COQ9O75208 318 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 MMP8P22894 467 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 HADHBP55084 474 aaKnown RBP16.13■□□□□ 0.17
LMNB1-203ENST00000460265 OTUD4Q01804 1114 aaKnown RBP16.13■□□□□ 0.17
LMNB1-203ENST00000460265 PIGHQ14442 188 aaPredicted RBP16.13■□□□□ 0.17
LMNB1-203ENST00000460265 SPOCD1Q6ZMY3 1216 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 TRMT10CQ7L0Y3 403 aaKnown RBP16.13■□□□□ 0.17
LMNB1-203ENST00000460265 GLIS1Q8NBF1 620 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 EXD1Q8NHP7 514 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 CD101Q93033 1021 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 PRMT7Q9NVM4 692 aaPredicted RBP16.13■□□□□ 0.17
LMNB1-203ENST00000460265 STRIP2Q9ULQ0 834 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 MAGED2Q9UNF1 606 aaPredicted RBP16.13■□□□□ 0.17
LMNB1-203ENST00000460265 GHRHRQ02643 423 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 AUHQ13825 339 aaKnown RBP16.13■□□□□ 0.17
LMNB1-203ENST00000460265 CCNG2Q16589 344 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 FAM47CQ5HY64 1035 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 ART4Q93070 314 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 MAD1L1Q9Y6D9 718 aa16.13■□□□□ 0.17
LMNB1-203ENST00000460265 GREB1LQ9C091 1923 aaPredicted RBP16.12■□□□□ 0.17
LMNB1-203ENST00000460265 CYP1A1P04798 512 aaPredicted RBP16.12■□□□□ 0.17
LMNB1-203ENST00000460265 DRG2P55039 364 aaKnown RBP16.12■□□□□ 0.17
LMNB1-203ENST00000460265 CASC4Q6P4E1 433 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 CFAP57Q96MR6 1250 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 WDR35Q9P2L0 1181 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 PNMA3Q9UL41 463 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 CNTNAP2Q9UHC6 1331 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 CXCL11O14625 94 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 SUN1O94901 812 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 NPTXRO95502 500 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 GH1P01241 217 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 LGALS2P05162 132 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 RBP3P10745 1247 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 ALADP13716 330 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 NRLP54845 237 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 EIF3EP60228 445 aaKnown RBP16.12■□□□□ 0.17
LMNB1-203ENST00000460265 PTPN11Q06124 597 aaPredicted RBP16.12■□□□□ 0.17
LMNB1-203ENST00000460265 MUM1Q2TAK8 710 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 TFDP3Q5H9I0 405 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 CENPUQ71F23 418 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 SPATA18Q8TC71 538 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 WHRNQ9P202 907 aa16.12■□□□□ 0.17
LMNB1-203ENST00000460265 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.11■□□□□ 0.17
LMNB1-203ENST00000460265 PMM2O15305 246 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 DYNC1I2Q13409 638 aaKnown RBP16.11■□□□□ 0.17
LMNB1-203ENST00000460265 PTPN20Q4JDL3 420 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 PIGWQ7Z7B1 504 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 OR6J1Q8NGC5 347 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 ZNF317Q96PQ6 595 aaPredicted RBP16.11■□□□□ 0.17
LMNB1-203ENST00000460265 OSMRQ99650 979 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 HMGXB4Q9UGU5 601 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 QSER1Q2KHR3 1735 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 MAP3K13O43283 966 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 AKAP5P24588 427 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 NDST1P52848 882 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 C15orf59Q2T9L4 293 aaPredicted RBP16.11■□□□□ 0.17
LMNB1-203ENST00000460265 ZFAND2BQ8WV99 257 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.11■□□□□ 0.17
LMNB1-203ENST00000460265 NINJ2Q9NZG7 142 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 A8MXQ7 604 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 PDHXO00330 501 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 KRT7P08729 469 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 LCP1P13796 627 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 MYLK4Q86YV6 388 aaPredicted RBP16.11■□□□□ 0.17
LMNB1-203ENST00000460265 SCUBE3Q8IX30 993 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 SMC6Q96SB8 1091 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 CPXM1Q96SM3 734 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 IQCGQ9H095 443 aaKnown RBP16.11■□□□□ 0.17
LMNB1-203ENST00000460265 ETNK1Q9HBU6 452 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 DPP3Q9NY33 737 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 NAALADL1Q9UQQ1 740 aa16.11■□□□□ 0.17
LMNB1-203ENST00000460265 POLR2AP24928 1970 aaKnown RBP16.1■□□□□ 0.17
LMNB1-203ENST00000460265 TMEM191CA6NGB0 347 aa16.1■□□□□ 0.17
LMNB1-203ENST00000460265 MTA2O94776 668 aa16.1■□□□□ 0.17
LMNB1-203ENST00000460265 ARF4P18085 180 aaPredicted RBP16.1■□□□□ 0.17
LMNB1-203ENST00000460265 SESN3P58005 492 aa16.1■□□□□ 0.17
LMNB1-203ENST00000460265 LAMC2Q13753 1193 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms