RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 PAEPP09466 180 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 CCL5P13501 91 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 CYP3A5P20815 502 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 RAD23BP54727 409 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 SH3BGRP55822 239 aaPredicted RBP10.92□□□□□ -0.66
HERC4-207ENST00000460168 ARPC4P59998 168 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 SOX4Q06945 474 aaPredicted RBP10.92□□□□□ -0.66
HERC4-207ENST00000460168 MEI1Q5TIA1 1274 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 PPP1R2P3Q6NXS1 205 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 CC2D1AQ6P1N0 951 aaPredicted RBP10.92□□□□□ -0.66
HERC4-207ENST00000460168 SAMD14Q8IZD0 417 aaPredicted RBP10.92□□□□□ -0.66
HERC4-207ENST00000460168 MCOLN2Q8IZK6 566 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 TTC39CQ8N584 583 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.92□□□□□ -0.66
HERC4-207ENST00000460168 CAGE1Q8TC20 777 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 TMEM176AQ96HP8 235 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 GAD1Q99259 594 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 NUP85Q9BW27 656 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 SLC38A7Q9NVC3 462 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 CNOT8Q9UFF9 292 aaKnown RBP10.92□□□□□ -0.66
HERC4-207ENST00000460168 HMGXB4Q9UGU5 601 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 COG5Q9UP83 839 aa10.92□□□□□ -0.66
HERC4-207ENST00000460168 EFCAB8A8MWE9 144 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 MGEA5O60502 916 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 THP07101 528 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 PRLRP16471 622 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 MCM3P25205 808 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 PNPLA4P41247 253 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 INCA1Q0VD86 236 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 RPS6KA1Q15418 735 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 C2CD6Q53TS8 623 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 SLC4A11Q8NBS3 891 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 ZNF564Q8TBZ8 553 aaPredicted RBP10.91□□□□□ -0.66
HERC4-207ENST00000460168 TFAP2BQ92481 460 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 UBXN4Q92575 508 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 TWNKQ96RR1 684 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 C11orf70Q9BRQ4 267 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 FAM124BQ9H5Z6 455 aaPredicted RBP10.91□□□□□ -0.66
HERC4-207ENST00000460168 PCDH18Q9HCL0 1135 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 ADAM22Q9P0K1 906 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 MAFFQ9ULX9 164 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 SSX2IPQ9Y2D8 614 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 GIT1Q9Y2X7 761 aa10.91□□□□□ -0.66
HERC4-207ENST00000460168 A0A0U1RQF3 1178 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 CTAGE15A4D2H0 777 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 ARL5CA6NH57 179 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 KPNA7A9QM74 516 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 PIRO00625 290 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 LSM8O95777 96 aaKnown RBP10.9□□□□□ -0.66
HERC4-207ENST00000460168 CYP1A2P05177 515 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 CTAGE8P0CG41 777 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 MYBL1P10243 752 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 FNTAP49354 379 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 TAF6P49848 677 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 NDST1P52848 882 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 HADHBP55084 474 aaKnown RBP10.9□□□□□ -0.66
HERC4-207ENST00000460168 CKAP4Q07065 602 aaKnown RBP10.9□□□□□ -0.66
HERC4-207ENST00000460168 SV2CQ496J9 727 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 NUGGCQ68CJ6 796 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 AGMOQ6ZNB7 445 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 MON1BQ7L1V2 547 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 DPH6Q7L8W6 267 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 NANOGNBQ7Z5D8 188 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 CTAGE6Q86UF2 777 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 CTAGE4Q8IX94 777 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 TMEM35BQ8NCS4 154 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 COG1Q8WTW3 980 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 HEXIM2Q96MH2 286 aaKnown RBP10.9□□□□□ -0.66
HERC4-207ENST00000460168 PPP1R10Q96QC0 940 aaKnown RBP10.9□□□□□ -0.66
HERC4-207ENST00000460168 ZSWIM1Q9BR11 485 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 NT5C1AQ9BXI3 368 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 UVRAGQ9P2Y5 699 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 AMFRQ9UKV5 643 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 ZNF623O75123 536 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 TADA3O75528 432 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 SMNDC1O75940 238 aaKnown RBP eCLIP10.9□□□□□ -0.66
HERC4-207ENST00000460168 FSBPO95073 299 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 SKIP12755 728 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 RRM1P23921 792 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 SCNN1GP51170 649 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 ERCC6LQ2NKX8 1250 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 LIN9Q5TKA1 542 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 THOC7Q6I9Y2 204 aaKnown RBP10.9□□□□□ -0.66
HERC4-207ENST00000460168 SLFN11Q7Z7L1 901 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 CCDC50Q8IVM0 306 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 SLC15A3Q8IY34 581 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 LZICQ8WZA0 190 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 PGBD4Q96DM1 585 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 ZNF518BQ9C0D4 1074 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 ELOVL4Q9GZR5 314 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 SYNCQ9H7C4 482 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 ZWILCHQ9H900 591 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 RSAD1Q9HA92 442 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 OGDHLQ9ULD0 1010 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 PCDHGC3Q9UN70 934 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 PRELID1Q9Y255 219 aa10.9□□□□□ -0.66
HERC4-207ENST00000460168 KCNK3O14649 394 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 SART1O43290 800 aaKnown RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 AFF1P51825 1210 aaKnown RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 C1QBPQ07021 282 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms