RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PPIFP30405 207 aaKnown RBP6.43□□□□□ -1.38
CCDC50-203ENST00000460064 CCT5P48643 541 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 VAV2P52735 878 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 FSTL1Q12841 308 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 CCNIQ14094 377 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 BEAN1Q3B7T3 259 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 USP39Q53GS9 565 aaKnown RBP6.43□□□□□ -1.38
CCDC50-203ENST00000460064 MRNIPQ6NTE8 343 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 ARMC6Q6NXE6 501 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 ZNF276Q8N554 614 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 IL17DQ8TAD2 202 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 TMEM171Q8WVE6 324 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 TRAPPC12Q8WVT3 735 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 FAM136AQ96C01 138 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 EVI5LQ96CN4 794 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 FAM227BQ96M60 508 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 TPSD1Q9BZJ3 242 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 MAGEH1Q9H213 219 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 SLC25A32Q9H2D1 315 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 UNKLQ9H9P5 680 aaKnown RBP6.43□□□□□ -1.38
CCDC50-203ENST00000460064 TMEM8AQ9HCN3 771 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.43□□□□□ -1.38
CCDC50-203ENST00000460064 SCAF8Q9UPN6 1271 aaKnown RBP6.43□□□□□ -1.38
CCDC50-203ENST00000460064 SSX2IPQ9Y2D8 614 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 SYT5O00445 386 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 ACKR2O00590 384 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 CCNT2O60583 730 aaKnown RBP6.42□□□□□ -1.38
CCDC50-203ENST00000460064 SRGAP2BP0DMP2 458 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 LAG3P18627 525 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 PAX3P23760 479 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 DDX6P26196 483 aaKnown RBP eCLIP6.42□□□□□ -1.38
CCDC50-203ENST00000460064 ADORA2AP29274 412 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 BMPR1AP36894 532 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 JAG1P78504 1218 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 PRKG1Q13976 671 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 SLC5A9Q2M3M2 681 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 TTLL10Q6ZVT0 673 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 TTC9BQ8N6N2 239 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 ZBTB45Q96K62 511 aaPredicted RBP6.42□□□□□ -1.38
CCDC50-203ENST00000460064 ISCA1Q9BUE6 129 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 SMPD4Q9NXE4 827 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 CNOT11Q9UKZ1 510 aaKnown RBP6.42□□□□□ -1.38
CCDC50-203ENST00000460064 TESMINQ9Y4I5 508 aa6.42□□□□□ -1.38
CCDC50-203ENST00000460064 MARCH11A6NNE9 402 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 PPM1DO15297 605 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 CD3EAPO15446 510 aaKnown RBP6.41□□□□□ -1.38
CCDC50-203ENST00000460064 USP1O94782 785 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 CSF1RP07333 972 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 HGFP14210 728 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 NSUN2Q08J23 767 aaKnown RBP eCLIP6.41□□□□□ -1.38
CCDC50-203ENST00000460064 FOXO1Q12778 655 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 POSTNQ15063 836 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 CERCAMQ5T4B2 595 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 DEPDC1Q5TB30 811 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 GATAD2AQ86YP4 633 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 SLC30A5Q8TAD4 765 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 CXorf38Q8TB03 319 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 SLC25A43Q8WUT9 341 aaPredicted RBP6.41□□□□□ -1.38
CCDC50-203ENST00000460064 ATRIPQ8WXE1 791 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 GRAMD1AQ96CP6 724 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 PTCD3Q96EY7 689 aaKnown RBP6.41□□□□□ -1.38
CCDC50-203ENST00000460064 ZNF668Q96K58 619 aaPredicted RBP6.41□□□□□ -1.38
CCDC50-203ENST00000460064 HIST1H2AAQ96QV6 131 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 CDK5RAP1Q96SZ6 601 aaKnown RBP6.41□□□□□ -1.38
CCDC50-203ENST00000460064 TMEM120AQ9BXJ8 343 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 ACTRT3Q9BYD9 372 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 CEP72Q9P209 647 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 DNAJB11Q9UBS4 358 aa6.41□□□□□ -1.38
CCDC50-203ENST00000460064 UNC119BA6NIH7 251 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 ASNA1O43681 348 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 SNX2O60749 519 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 DHRS4L1P0CG22 281 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 HSD3B1P14060 373 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 NR4A1P22736 598 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 UQCRC1P31930 480 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 GATMP50440 423 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 PDE6CP51160 858 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 PGDP52209 483 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 BCAT1P54687 386 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 CTSWP56202 376 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 SLC25A3Q00325 362 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 PPFIA1Q13136 1202 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 R3HDM1Q15032 1099 aaKnown RBP6.4□□□□□ -1.38
CCDC50-203ENST00000460064 TIGD6Q17RP2 521 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 NRN1LQ496H8 165 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 RASGRP3Q8IV61 690 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 GALNT15Q8N3T1 639 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 FAM109AQ8N4B1 249 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 B3GALNT2Q8NCR0 500 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 MYEOVQ96EZ4 313 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 PLEKHG4BQ96PX9 1271 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 ADAM2Q99965 735 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 EPS8L2Q9H6S3 715 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 ZNF703Q9H7S9 590 aaPredicted RBP6.4□□□□□ -1.38
CCDC50-203ENST00000460064 DTNAQ9Y4J8 743 aa6.4□□□□□ -1.38
CCDC50-203ENST00000460064 FER1L4A9Z1Z3 1794 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 ZSCAN9O15535 394 aaPredicted RBP6.39□□□□□ -1.39
CCDC50-203ENST00000460064 ITGA5P08648 1049 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 PPP3CBP16298 524 aa6.39□□□□□ -1.39
CCDC50-203ENST00000460064 NPPBP16860 134 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms