RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TMEM120BA0PK00 339 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 SLC15A5A6NIM6 579 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 E5RJQ4 531 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 IFNB1P01574 187 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 SETSIPP0DME0 302 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 CYP4F22Q6NT55 531 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 CHADLQ6NUI6 762 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 FAM183BPQ6ZVS7 135 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 CYP4V2Q6ZWL3 525 aaPredicted RBP17.48■□□□□ 0.39
CCDC43-202ENST00000457422 CENPUQ71F23 418 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 PIGWQ7Z7B1 504 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 LRRC52Q8N7C0 313 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 HSPH1Q92598 858 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 ZMAT2Q96NC0 199 aaKnown RBP17.48■□□□□ 0.39
CCDC43-202ENST00000457422 EIF2AQ9BY44 585 aaKnown RBP17.48■□□□□ 0.39
CCDC43-202ENST00000457422 C10orf88Q9H8K7 445 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 NRCAMQ92823 1304 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 SMIM35A0A1B0GVV1 85 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 A6NJR5 290 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 FSBPO95073 299 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 F2P00734 622 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 LIG3P49916 1009 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 OR6B2Q6IFH4 312 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 TRNP1Q6NT89 227 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 NOTUMQ6P988 496 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 CATSPER4Q7RTX7 472 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 RFX6Q8HWS3 928 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 CYP4X1Q8N118 509 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 C12orf29Q8N999 325 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 P3H4Q92791 437 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 PIWIL1Q96J94 861 aaKnown RBP17.48■□□□□ 0.39
CCDC43-202ENST00000457422 PEBP4Q96S96 227 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 MRPL45Q9BRJ2 306 aaKnown RBP17.48■□□□□ 0.39
CCDC43-202ENST00000457422 PPCSQ9HAB8 311 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 CDHR5Q9HBB8 845 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 TUBGCP4Q9UGJ1 667 aa17.48■□□□□ 0.39
CCDC43-202ENST00000457422 MBLAC1A4D2B0 266 aaPredicted RBP17.47■□□□□ 0.39
CCDC43-202ENST00000457422 FOXO6A8MYZ6 492 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 SMAPO00193 183 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 DPYSL4O14531 572 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 SMIM10L2AP0DMW4 78 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 SMIM10L2BP0DMW5 78 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 CREB1P16220 341 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 GDF10P55107 478 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 SPRYD7Q5W111 196 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 PPIL6Q8IXY8 311 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 LRRC34Q8IZ02 419 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 RXFP2Q8WXD0 754 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 OSMRQ99650 979 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 SLC5A4Q9NY91 659 aa17.47■□□□□ 0.39
CCDC43-202ENST00000457422 DYNC1LI2O43237 492 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 ECM2O94769 699 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 BRAFP15056 766 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 PDGFRAP16234 1089 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 RGS7P49802 495 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 YARSP54577 528 aaKnown RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 SLC20A2Q08357 652 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 NR1H3Q13133 447 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 FASTKD3Q14CZ7 662 aaKnown RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 RAB6CQ53S08 254 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 PRAMEF19Q5SWL8 479 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 PPP1R26Q5T8A7 1209 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 SH3PXD2AQ5TCZ1 1133 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 ALKAL1Q6UXT8 129 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 MICALL1Q8N3F8 863 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 NAT8LQ8N9F0 302 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 BEST2Q8NFU1 509 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 RSAD2Q8WXG1 361 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 MAML1Q92585 1016 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 SLC4A5Q9BY07 1137 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 RAB6CQ9H0N0 254 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 CNTN3Q9P232 1028 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 HES2Q9Y543 173 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 SNX9Q9Y5X1 595 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 EXOC1LA0A1B0GW35 172 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 DARSP14868 501 aaKnown RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 GCAP28676 217 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 RDXP35241 583 aaKnown RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 IFNAR2P48551 515 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 CTCFP49711 727 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 ITIH4Q14624 930 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 RASA2Q15283 850 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 GLRA4Q5JXX5 417 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 OLFML1Q6UWY5 402 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 CCDC121Q6ZUS5 278 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 TMEM110Q86TL2 294 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 UNC93AQ86WB7 457 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 TTC30AQ86WT1 665 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 CCDC197Q8NCU1 140 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 CPT1BQ92523 772 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 USP6NLQ92738 828 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 C18orf25Q96B23 403 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 LENG1Q96BZ8 264 aaPredicted RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 NSRP1Q9H0G5 558 aaKnown RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 GNEQ9Y223 722 aaKnown RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 NME7Q9Y5B8 376 aa17.46■□□□□ 0.39
CCDC43-202ENST00000457422 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.46■□□□□ 0.39
CCDC43-202ENST00000457422 MCF2LO15068 1137 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 GRAP2O75791 330 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 AXLP30530 894 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms