RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ARHGAP29Q52LW3 1261 aa24.59■■□□□ 1.53
CBX3-204ENST00000456948 CREBRFQ8IUR6 639 aa24.59■■□□□ 1.53
CBX3-204ENST00000456948 NELL2Q99435 816 aa24.59■■□□□ 1.53
CBX3-204ENST00000456948 IRF2BPLQ9H1B7 796 aa24.59■■□□□ 1.53
CBX3-204ENST00000456948 TBC1D17Q9HA65 648 aa24.59■■□□□ 1.53
CBX3-204ENST00000456948 TRPC7Q9HCX4 862 aa24.59■■□□□ 1.53
CBX3-204ENST00000456948 WDFY4Q6ZS81 3184 aa24.59■■□□□ 1.53
CBX3-204ENST00000456948 MUC6Q6W4X9 2439 aa24.59■■□□□ 1.53
CBX3-204ENST00000456948 KRBA1A5PL33 1030 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 NRG2O14511 850 aaPredicted RBP24.58■■□□□ 1.53
CBX3-204ENST00000456948 CHADO15335 359 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 CILPO75339 1184 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 USP17L7P0C7H9 530 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 FAM200BP0CF97 657 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 AOC1P19801 751 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 YWHAQP27348 245 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 MARSP56192 900 aaKnown RBP24.58■■□□□ 1.53
CBX3-204ENST00000456948 STARD6P59095 220 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 TXNDC8Q6A555 127 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 C1orf228Q6PIY5 440 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 TMEM150AQ86TG1 271 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 FUKQ8N0W3 1084 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 PDZD8Q8NEN9 1154 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 SLC2A14Q8TDB8 520 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 BPIFB1Q8TDL5 484 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 CYFIP2Q96F07 1278 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 HEXIM2Q96MH2 286 aaKnown RBP24.58■■□□□ 1.53
CBX3-204ENST00000456948 HNRNPABQ99729 332 aaKnown RBP24.58■■□□□ 1.53
CBX3-204ENST00000456948 TTLL2Q9BWV7 592 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 KRT82Q9NSB4 513 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 CISHQ9NSE2 258 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 TDP1Q9NUW8 608 aa24.58■■□□□ 1.53
CBX3-204ENST00000456948 PTPRDP23468 1912 aa24.57■■□□□ 1.52
CBX3-204ENST00000456948 MAN2B1O00754 1011 aa24.57■■□□□ 1.52
CBX3-204ENST00000456948 GLULP15104 373 aa24.57■■□□□ 1.52
CBX3-204ENST00000456948 SLC8A3P57103 927 aa24.57■■□□□ 1.52
CBX3-204ENST00000456948 FCHO2Q0JRZ9 810 aa24.57■■□□□ 1.52
CBX3-204ENST00000456948 CT47A1Q5JQC4 288 aaPredicted RBP24.57■■□□□ 1.52
CBX3-204ENST00000456948 CC2D1AQ6P1N0 951 aaPredicted RBP24.57■■□□□ 1.52
CBX3-204ENST00000456948 FAM114A1Q8IWE2 563 aa24.57■■□□□ 1.52
CBX3-204ENST00000456948 STKLD1Q8NE28 680 aa24.57■■□□□ 1.52
CBX3-204ENST00000456948 NT5C1BQ96P26 610 aa24.57■■□□□ 1.52
CBX3-204ENST00000456948 FBXO44Q9H4M3 255 aa24.57■■□□□ 1.52
CBX3-204ENST00000456948 SIT1Q9Y3P8 196 aa24.57■■□□□ 1.52
CBX3-204ENST00000456948 KMT2EQ8IZD2 1858 aa24.57■■□□□ 1.52
CBX3-204ENST00000456948 ZNF638Q14966 1978 aaKnown RBP24.56■■□□□ 1.52
CBX3-204ENST00000456948 NCAM2O15394 837 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 ABL1P00519 1130 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 AFPP02771 609 aaKnown RBP24.56■■□□□ 1.52
CBX3-204ENST00000456948 CKMP06732 381 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 CCDC130P13994 396 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 NPR3P17342 541 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 HDCP19113 662 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 KCNH2Q12809 1159 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 ORC1Q13415 861 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 CUL2Q13617 745 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 ZNF268Q14587 947 aaPredicted RBP24.56■■□□□ 1.52
CBX3-204ENST00000456948 ZNF852Q6ZMS4 543 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 TRIM59Q8IWR1 403 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 C12orf29Q8N999 325 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 PRSS33Q8NF86 280 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 OVCA2Q8WZ82 227 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 TATDN2Q93075 761 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 MSANTD3Q96H12 275 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 TMEM176AQ96HP8 235 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 FAM49BQ9NUQ9 324 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 HMGXB4Q9UGU5 601 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 MYH10P35580 1976 aa24.56■■□□□ 1.52
CBX3-204ENST00000456948 KANSL1LA0AUZ9 987 aa24.55■■□□□ 1.52
CBX3-204ENST00000456948 MBD3O95983 291 aa24.55■■□□□ 1.52
CBX3-204ENST00000456948 ERCC5P28715 1186 aaPredicted RBP24.55■■□□□ 1.52
CBX3-204ENST00000456948 ADORA2BP29275 332 aa24.55■■□□□ 1.52
CBX3-204ENST00000456948 MLLT6P55198 1093 aaPredicted RBP24.55■■□□□ 1.52
CBX3-204ENST00000456948 NHLH1Q02575 133 aa24.55■■□□□ 1.52
CBX3-204ENST00000456948 IFRD2Q12894 506 aaPredicted RBP24.55■■□□□ 1.52
CBX3-204ENST00000456948 TAF10Q12962 218 aa24.55■■□□□ 1.52
CBX3-204ENST00000456948 ZNF394Q53GI3 561 aa24.55■■□□□ 1.52
CBX3-204ENST00000456948 GPIHBP1Q8IV16 184 aa24.55■■□□□ 1.52
CBX3-204ENST00000456948 KCNK16Q96T55 309 aa24.55■■□□□ 1.52
CBX3-204ENST00000456948 NUP210Q8TEM1 1887 aaPredicted RBP24.55■■□□□ 1.52
CBX3-204ENST00000456948 DENND4CQ5VZ89 1909 aa24.55■■□□□ 1.52
CBX3-204ENST00000456948 MAP3K7CLP57077 242 aa24.54■■□□□ 1.52
CBX3-204ENST00000456948 TPRG1Q6ZUI0 275 aa24.54■■□□□ 1.52
CBX3-204ENST00000456948 PAQR9Q6ZVX9 377 aa24.54■■□□□ 1.52
CBX3-204ENST00000456948 FBXO32Q969P5 355 aa24.54■■□□□ 1.52
CBX3-204ENST00000456948 OSBPL6Q9BZF3 934 aa24.54■■□□□ 1.52
CBX3-204ENST00000456948 C8orf33Q9H7E9 229 aaPredicted RBP24.54■■□□□ 1.52
CBX3-204ENST00000456948 CSNK1G1Q9HCP0 422 aa24.54■■□□□ 1.52
CBX3-204ENST00000456948 KIAA1257Q9ULG3 409 aa24.54■■□□□ 1.52
CBX3-204ENST00000456948 LRRN2O75325 713 aa24.53■■□□□ 1.52
CBX3-204ENST00000456948 KPNA1P52294 538 aaPredicted RBP24.53■■□□□ 1.52
CBX3-204ENST00000456948 CACNA2D1P54289 1103 aa24.53■■□□□ 1.52
CBX3-204ENST00000456948 PTPN5P54829 565 aa24.53■■□□□ 1.52
CBX3-204ENST00000456948 USP46P62068 366 aa24.53■■□□□ 1.52
CBX3-204ENST00000456948 LRMPQ12912 555 aa24.53■■□□□ 1.52
CBX3-204ENST00000456948 CWF19L1Q69YN2 538 aaKnown RBP24.53■■□□□ 1.52
CBX3-204ENST00000456948 TMEM105Q8N8V8 129 aa24.53■■□□□ 1.52
CBX3-204ENST00000456948 WHAMMQ8TF30 809 aa24.53■■□□□ 1.52
CBX3-204ENST00000456948 USP13Q92995 863 aaPredicted RBP24.53■■□□□ 1.52
CBX3-204ENST00000456948 TWNKQ96RR1 684 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms