RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 PFKLP17858 780 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 HDCP19113 662 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 GCLMP48507 274 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 NOP14P78316 857 aaKnown RBP11.36□□□□□ -0.59
DDX39A-203ENST00000454233 AMPD2Q01433 879 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 TNK2Q07912 1038 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 MTAPQ13126 283 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 FZD5Q13467 585 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 RUNX3Q13761 415 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 PDGFRLQ15198 375 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 ZCWPW2Q504Y3 356 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 DGKKQ5KSL6 1271 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 C1orf220Q5T0J3 134 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 ZNF658Q5TYW1 1059 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-203ENST00000454233 FAM35AQ86V20 835 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 UNC93AQ86WB7 457 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 SMYD4Q8IYR2 804 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-203ENST00000454233 MAML2Q8IZL2 1156 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-203ENST00000454233 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 ARL14EPQ8N8R7 260 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-203ENST00000454233 TTC16Q8NEE8 873 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 ENGASEQ8NFI3 743 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 ELMO3Q96BJ8 720 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 TIGD1Q96MW7 591 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 SLITRK1Q96PX8 696 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 CYP2S1Q96SQ9 504 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 FAM83CQ9BQN1 747 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 TTLL2Q9BWV7 592 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 DNAI2Q9GZS0 605 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 SDCBP2Q9H190 292 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 MMRN2Q9H8L6 949 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 OBSL1O75147 1896 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 ZFHX2Q9C0A1 2572 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-203ENST00000454233 PTPRDP23468 1912 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 C2orf78A6NCI8 922 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 KINO60870 393 aaKnown RBP11.35□□□□□ -0.59
DDX39A-203ENST00000454233 RTN3O95197 1032 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-203ENST00000454233 ABL1P00519 1130 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 LMNAP02545 664 aaKnown RBP11.35□□□□□ -0.59
DDX39A-203ENST00000454233 CHRNB1P11230 501 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 GTF2H1P32780 548 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 PRCPP42785 496 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 IFNAR2P48551 515 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 CCR3P51677 355 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 NDST1P52848 882 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 USP46P62068 366 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 PPP3CAQ08209 521 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 IFRD2Q12894 506 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-203ENST00000454233 STIM1Q13586 685 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 MTF1Q14872 753 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 PON2Q15165 354 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 COBLL1Q53SF7 1204 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 KRT39Q6A163 491 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 SPOPLQ6IQ16 392 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 ACOT1Q86TX2 421 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 NUP93Q8N1F7 819 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 ATRIPQ8WXE1 791 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 EXOC4Q96A65 974 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 SMARCD1Q96GM5 515 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 SLC22A12Q96S37 553 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 EBF3Q9H4W6 596 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 CYP3A43Q9HB55 503 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 TMEM8AQ9HCN3 771 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 DMAP1Q9NPF5 467 aaPredicted RBP11.35□□□□□ -0.59
DDX39A-203ENST00000454233 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.35□□□□□ -0.591e-6■■■■■ 28.1
DDX39A-203ENST00000454233 GCNT4Q9P109 453 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 PCDHA5Q9Y5H7 936 aa11.35□□□□□ -0.59
DDX39A-203ENST00000454233 ZNF840PA6NDX5 716 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 AP1G2O75843 785 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 YWHAQP27348 245 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 ASPAP45381 313 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 CACNA2D1P54289 1103 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 NRLP54845 237 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 TAF10Q12962 218 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 USP4Q13107 963 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 ZNF77Q15935 545 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 TRIM68Q6AZZ1 485 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 TXNDC11Q6PKC3 985 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 MAMSTRQ6ZN01 415 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 ADSSL1Q8N142 457 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 CRYBG2Q8N1P7 616 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 CPA6Q8N4T0 437 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 PDZD8Q8NEN9 1154 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 SPATA20Q8TB22 786 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 TAS1R2Q8TE23 839 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 SH3RF2Q8TEC5 729 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 OVCA2Q8WZ82 227 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 ATP2A3Q93084 1043 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 FBXO32Q969P5 355 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 EEF2KMTQ96G04 330 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 FAM126AQ9BYI3 521 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-203ENST00000454233 NIF3L1Q9GZT8 377 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 HPS4Q9NQG7 708 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 PRMT8Q9NR22 394 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-203ENST00000454233 KRT82Q9NSB4 513 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 TMEM30AQ9NV96 361 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 ZSCAN32Q9NX65 697 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 DUS2Q9NX74 493 aaKnown RBP11.34□□□□□ -0.59
DDX39A-203ENST00000454233 CIZ1Q9ULV3 898 aaPredicted RBP11.34□□□□□ -0.59
DDX39A-203ENST00000454233 ARHGAP26Q9UNA1 814 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms