RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 NOL4O94818 638 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 FAM163BP0C2L3 166 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 ANXA13P27216 316 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 MAGEA11P43364 429 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 PMS1P54277 932 aaKnown RBP10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 PRKCQQ04759 706 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 ORC1Q13415 861 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 UBXN2BQ14CS0 331 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 TXNDC8Q6A555 127 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 PHLDB3Q6NSJ2 640 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 TPRG1Q6ZUI0 275 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 B3GALNT2Q8NCR0 500 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 TTC8Q8TAM2 541 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 TAS1R2Q8TE23 839 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 DEPDC1BQ8WUY9 529 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 E2F7Q96AV8 911 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 LRRC3BQ96PB8 259 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 PHOX2BQ99453 314 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 MED10Q9BTT4 135 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 B3GNT5Q9BYG0 378 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 VRTNQ9H8Y1 702 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 MAN1B1Q9UKM7 699 aa10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 MTF2Q9Y483 593 aaPredicted RBP10.08□□□□□ -0.8
CDC42EP3-203ENST00000453555 BIN1O00499 593 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 TADA3O75528 432 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 PRAMEF12O95522 483 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 ASS1P00966 412 aaKnown RBP10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 EPB41P11171 864 aaKnown RBP10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 P4HA1P13674 534 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 AVPR1AP37288 418 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 ANP32AP39687 249 aaKnown RBP10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 CACNA2D1P54289 1103 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 COBLL1Q53SF7 1204 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 TCERG1LQ5VWI1 586 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 VSTM1Q6UX27 236 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 ACOT1Q86TX2 421 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 CCDC105Q8IYK2 499 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 CMTM8Q8IZV2 173 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 ADSSL1Q8N142 457 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 DTWD2Q8NBA8 298 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 TTC16Q8NEE8 873 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 PJA1Q8NG27 643 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 MRPS31Q92665 395 aaKnown RBP10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 TAF4BQ92750 862 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 ATOH1Q92858 354 aaPredicted RBP10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 DNASE1L2Q92874 299 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 IRF7Q92985 503 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 TRMT2BQ96GJ1 504 aaKnown RBP10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 ZFYVE19Q96K21 471 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 SPATA17Q96L03 361 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 IMPG2Q9BZV3 1241 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 ZNF518BQ9C0D4 1074 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 TRPC7Q9HCX4 862 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 TMEM30AQ9NV96 361 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 UXTQ9UBK9 157 aaPredicted RBP10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 HMGXB4Q9UGU5 601 aa10.07□□□□□ -0.8
CDC42EP3-203ENST00000453555 MUC6Q6W4X9 2439 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 FAM170BA6NMN3 283 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 F8VP50 259 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 TRIM66O15016 1216 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 CHADO15335 359 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 GLULP15104 373 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 ASPAP45381 313 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 NDST1P52848 882 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 USP46P62068 366 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 NOP14P78316 857 aaKnown RBP10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 IFRD2Q12894 506 aaPredicted RBP10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 STIM1Q13586 685 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 CAMK4Q16566 473 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 DCAF17Q5H9S7 520 aaPredicted RBP10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 SWT1Q5T5J6 900 aaKnown RBP10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 KRT39Q6A163 491 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 KLHL10Q6JEL2 608 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 ZNF852Q6ZMS4 543 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 DENND5BQ6ZUT9 1274 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 ALYREFQ86V81 257 aaKnown RBP10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 ELOA2Q8IYF1 753 aaPredicted RBP10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 CELF5Q8N6W0 485 aaKnown RBP10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 BPIFB1Q8TDL5 484 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 CSGALNACT1Q8TDX6 532 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 USP13Q92995 863 aaPredicted RBP10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 TNIP3Q96KP6 325 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 MYRFLQ96LU7 910 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 CYP2S1Q96SQ9 504 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 DDX23Q9BUQ8 820 aaKnown RBP10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 ELOVL4Q9GZR5 314 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 APOBEC3GQ9HC16 384 aaKnown RBP10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 TMEM8AQ9HCN3 771 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 LTB4R2Q9NPC1 389 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 DLGAP2Q9P1A6 1054 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 NDRG2Q9UN36 371 aaKnown RBP10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 CCL26Q9Y258 94 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 PIAS3Q9Y6X2 628 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 ATP8B3O60423 1300 aa10.06□□□□□ -0.8
CDC42EP3-203ENST00000453555 C2orf78A6NCI8 922 aa10.05□□□□□ -0.8
CDC42EP3-203ENST00000453555 SHISA7A6NL88 538 aa10.05□□□□□ -0.8
CDC42EP3-203ENST00000453555 ARNTLO00327 626 aa10.05□□□□□ -0.8
CDC42EP3-203ENST00000453555 PSMA7O14818 248 aa10.05□□□□□ -0.8
CDC42EP3-203ENST00000453555 STX10O60499 249 aa10.05□□□□□ -0.8
CDC42EP3-203ENST00000453555 ABL1P00519 1130 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms