RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 WEE1P30291 646 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 PDE6CP51160 858 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 MAP3K7CLP57077 242 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 HTR4Q13639 388 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 KRT31Q15323 416 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 CNGA2Q16280 664 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 FAM78AQ5JUQ0 283 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 MIIPQ5JXC2 388 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 PPP1R26Q5T8A7 1209 aaPredicted RBP9.4□□□□□ -0.9
COL8A1-203ENST00000452013 TRIM65Q6PJ69 517 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 PARM1Q6UWI2 310 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 MON1AQ86VX9 555 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 ARHGEF19Q8IW93 802 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 AOPEPQ8N6M6 819 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 UBR7Q8N806 425 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 ANKRD52Q8NB46 1076 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 PDZD8Q8NEN9 1154 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 ZSCAN18Q8TBC5 510 aaPredicted RBP9.4□□□□□ -0.9
COL8A1-203ENST00000452013 OVCA2Q8WZ82 227 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 ELSPBP1Q96BH3 223 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 ZSWIM3Q96MP5 696 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 ASB16Q96NS5 453 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 SLITRK1Q96PX8 696 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 KCNK16Q96T55 309 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 SMOQ99835 787 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 TTLL2Q9BWV7 592 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 SLC46A2Q9BY10 475 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 DUSP16Q9BY84 665 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 FBXO44Q9H4M3 255 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 EPHX3Q9H6B9 360 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 TRPV4Q9HBA0 871 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 PNPLA8Q9NP80 782 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 RRAGDQ9NQL2 400 aaPredicted RBP9.4□□□□□ -0.9
COL8A1-203ENST00000452013 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 TAB2Q9NYJ8 693 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 APEX2Q9UBZ4 518 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 LIMA1Q9UHB6 759 aaKnown RBP9.4□□□□□ -0.9
COL8A1-203ENST00000452013 NUMBLQ9Y6R0 609 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 TNFRSF10BO14763 440 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 MED7O43513 233 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 ABL1P00519 1130 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 KRT5P13647 590 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 NPR3P17342 541 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 AVPR1AP37288 418 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 COPB1P53618 953 aaKnown RBP9.39□□□□□ -0.91
COL8A1-203ENST00000452013 CACNA2D1P54289 1103 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 CYP4F8P98187 520 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 TAF10Q12962 218 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 NCAPHQ15003 741 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 ARHGAP44Q17R89 818 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 FILIP1LQ4L180 1135 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 TANGO2Q6ICL3 276 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 TRIM67Q6ZTA4 783 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 ARID3BQ8IVW6 561 aaPredicted RBP9.39□□□□□ -0.91
COL8A1-203ENST00000452013 YAF2Q8IY57 180 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 CMTM8Q8IZV2 173 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 MAB21L3Q8N8X9 362 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 RBBP8NLQ8NC74 664 aaPredicted RBP9.39□□□□□ -0.91
COL8A1-203ENST00000452013 STKLD1Q8NE28 680 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 DEPDC1BQ8WUY9 529 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 RSAD2Q8WXG1 361 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 FGF14Q92915 247 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 KAT5Q92993 513 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 KREMEN1Q96MU8 473 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 FUCA2Q9BTY2 467 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 TRMT61BQ9BVS5 477 aaKnown RBP9.39□□□□□ -0.91
COL8A1-203ENST00000452013 TSPY26PQ9H489 355 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 THG1LQ9NWX6 298 aaKnown RBP9.39□□□□□ -0.91
COL8A1-203ENST00000452013 OBP2AQ9NY56 170 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 IL37Q9NZH6 218 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 CHORDC1Q9UHD1 332 aaPredicted RBP9.39□□□□□ -0.91
COL8A1-203ENST00000452013 DNAJC12Q9UKB3 198 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 CNTN6Q9UQ52 1028 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 CITO14578 2027 aa9.39□□□□□ -0.91
COL8A1-203ENST00000452013 TRAV19A0A0A6YYK7 116 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 ZNF840PA6NDX5 716 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 RNF225M0QZC1 329 aaPredicted RBP9.38□□□□□ -0.91
COL8A1-203ENST00000452013 BEST1O76090 585 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 USP17L7P0C7H9 530 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 SRFP11831 508 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 ZNF18P17022 549 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 HDCP19113 662 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 RFX1P22670 979 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 USP8P40818 1118 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 SLC5A3P53794 718 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 BPIFB4P59827 614 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 USP46P62068 366 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 PFKPQ01813 784 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 PTK2Q05397 1052 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 SIGLEC14Q08ET2 396 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 KCNMA1Q12791 1236 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 IFRD2Q12894 506 aaPredicted RBP9.38□□□□□ -0.91
COL8A1-203ENST00000452013 KLHDC7AQ5VTJ3 777 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 TXNDC8Q6A555 127 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 LCLAT1Q6UWP7 414 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 CLEC20AQ6ZU45 233 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 TMEM150AQ86TG1 271 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 MFSD6LQ8IWD5 586 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 CELF5Q8N6W0 485 aaKnown RBP9.38□□□□□ -0.91
COL8A1-203ENST00000452013 ZMIZ2Q8NF64 920 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms