RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 DDR2Q16832 855 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 CCDC142Q17RM4 750 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 ARHGAP15Q53QZ3 475 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 GPR158Q5T848 1215 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 STPG1Q5TH74 334 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 SDHAF4Q5VUM1 108 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 TDRD10Q5VZ19 366 aaKnown RBP18.72■□□□□ 0.59
FAM3A-216ENST00000449971 C1orf228Q6PIY5 440 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 GAREM2Q75VX8 874 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 KBTBD6Q86V97 674 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 RALGPS2Q86X27 583 aaPredicted RBP18.72■□□□□ 0.59
FAM3A-216ENST00000449971 SMYD4Q8IYR2 804 aaPredicted RBP18.72■□□□□ 0.59
FAM3A-216ENST00000449971 OR6B3Q8NGW1 331 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 TMC2Q8TDI7 906 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 LRRC3BQ96PB8 259 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 PKMYT1Q99640 499 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 MRPL45Q9BRJ2 306 aaKnown RBP18.72■□□□□ 0.59
FAM3A-216ENST00000449971 ABCB6Q9NP58 842 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 RMND1Q9NWS8 449 aa18.72■□□□□ 0.59
FAM3A-216ENST00000449971 ATG2BQ96BY7 2078 aa18.71■□□□□ 0.59
FAM3A-216ENST00000449971 RPP40O75818 363 aaKnown RBP18.71■□□□□ 0.59
FAM3A-216ENST00000449971 PAPSS2O95340 614 aaPredicted RBP18.71■□□□□ 0.59
FAM3A-216ENST00000449971 SMC2O95347 1197 aa18.71■□□□□ 0.59
FAM3A-216ENST00000449971 C4BPAP04003 597 aaKnown RBP18.71■□□□□ 0.59
FAM3A-216ENST00000449971 NR2F2P24468 414 aa18.71■□□□□ 0.59
FAM3A-216ENST00000449971 RPL13P26373 211 aaKnown RBP18.71■□□□□ 0.59
FAM3A-216ENST00000449971 CLDN10P78369 228 aa18.71■□□□□ 0.59
FAM3A-216ENST00000449971 FCHO2Q0JRZ9 810 aa18.71■□□□□ 0.59
FAM3A-216ENST00000449971 NCOA4Q13772 614 aa18.71■□□□□ 0.59
FAM3A-216ENST00000449971 PKN3Q6P5Z2 889 aa18.71■□□□□ 0.59
FAM3A-216ENST00000449971 FAM171BQ6P995 826 aa18.71■□□□□ 0.59
FAM3A-216ENST00000449971 GCNAQ96QF7 691 aa18.71■□□□□ 0.59
FAM3A-216ENST00000449971 XYLT2Q9H1B5 865 aa18.71■□□□□ 0.59
FAM3A-216ENST00000449971 HOOK1Q9UJC3 728 aaKnown RBP18.71■□□□□ 0.59
FAM3A-216ENST00000449971 MAGED2Q9UNF1 606 aaPredicted RBP18.71■□□□□ 0.59
FAM3A-216ENST00000449971 TSC2P49815 1807 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 TACC1O75410 805 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 STAU1O95793 577 aaKnown RBP18.7■□□□□ 0.58
FAM3A-216ENST00000449971 FAM163BP0C2L3 166 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 CSH1P0DML2 217 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 CSH2P0DML3 217 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 CDC25CP30307 473 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 VAMP7P51809 220 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 CYP4F8P98187 520 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 ADAM9Q13443 819 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 MAPRE1Q15691 268 aaKnown RBP18.7■□□□□ 0.58
FAM3A-216ENST00000449971 NFIL3Q16649 462 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 ZNF699Q32M78 642 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 ARHGAP29Q52LW3 1261 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 PSAPL1Q6NUJ1 521 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 C4orf50Q6ZRC1 276 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 CACNA2D4Q7Z3S7 1137 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 SCN4BQ8IWT1 228 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 STKLD1Q8NE28 680 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 GAB3Q8WWW8 586 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 ERCC4Q92889 916 aaPredicted RBP18.7■□□□□ 0.58
FAM3A-216ENST00000449971 TIGD1Q96MW7 591 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 GSDMAQ96QA5 445 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 SMG9Q9H0W8 520 aaKnown RBP18.7■□□□□ 0.58
FAM3A-216ENST00000449971 IL21Q9HBE4 155 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 CRTAC1Q9NQ79 661 aa18.7■□□□□ 0.58
FAM3A-216ENST00000449971 POLR3BQ9NW08 1133 aaPredicted RBP18.7■□□□□ 0.58
FAM3A-216ENST00000449971 MAGEC2Q9UBF1 373 aaPredicted RBP18.7■□□□□ 0.58
FAM3A-216ENST00000449971 CIZ1Q9ULV3 898 aaPredicted RBP18.7■□□□□ 0.58
FAM3A-216ENST00000449971 SPAG17Q6Q759 2223 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 IKBKBO14920 756 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 AKAP3O75969 853 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 VNN1O95497 513 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 ZNF806P0C7X5 589 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 KRT13P13646 458 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 LIMK1P53667 647 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 MLLT6P55198 1093 aaPredicted RBP18.69■□□□□ 0.58
FAM3A-216ENST00000449971 CYP27A1Q02318 531 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 CCINQ13939 588 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 CFAP221Q4G0U5 840 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 ZNF667Q5HYK9 610 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 TCEAL6Q6IPX3 200 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 FAM186BQ8IYM0 893 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 TCEAL3Q969E4 200 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 SMARCE1Q969G3 411 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 MYLPFQ96A32 169 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 ELMO3Q96BJ8 720 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 FUBP3Q96I24 572 aaKnown RBP eCLIP18.69■□□□□ 0.58
FAM3A-216ENST00000449971 TASP1Q9H6P5 420 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 SLC8A2Q9UPR5 921 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 PCDHA5Q9Y5H7 936 aa18.69■□□□□ 0.58
FAM3A-216ENST00000449971 A8MXQ7 604 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 MAPK13O15264 365 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 EPN2O95208 641 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 PRAMEF12O95522 483 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 HMGA1P17096 107 aaKnown RBP18.68■□□□□ 0.58
FAM3A-216ENST00000449971 PTPN1P18031 435 aaKnown RBP18.68■□□□□ 0.58
FAM3A-216ENST00000449971 BDNFP23560 247 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 PSMC2P35998 433 aaKnown RBP18.68■□□□□ 0.58
FAM3A-216ENST00000449971 SGSM1Q2NKQ1 1148 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 ZACNQ401N2 412 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 MDH1BQ5I0G3 518 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 ZNF658Q5TYW1 1059 aaPredicted RBP18.68■□□□□ 0.58
FAM3A-216ENST00000449971 RNF43Q68DV7 783 aa18.68■□□□□ 0.58
FAM3A-216ENST00000449971 SV2AQ7L0J3 742 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms