RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 IGHV1OR15-9A0A0B4J2B8 117 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 A0A1B0GTW7 788 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 CDC14CA4D256 554 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 OR6C75A6NL08 312 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 SGK1O00141 431 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 VNN2O95498 520 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 KLF8O95600 359 aaPredicted RBP8.58□□□□□ -1.04
LINC01961-201ENST00000449954 NFATC1O95644 943 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 JUPP14923 745 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 RHOQP17081 205 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 GLRA2P23416 452 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 RPL9P32969 192 aaKnown RBP8.58□□□□□ -1.04
LINC01961-201ENST00000449954 MCM4P33991 863 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 ARL2P36404 184 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 GRK6P43250 576 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 YWHAHQ04917 246 aaPredicted RBP8.58□□□□□ -1.04
LINC01961-201ENST00000449954 CCDC173Q0VFZ6 552 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 GPR17Q13304 367 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 PPP2R5CQ13362 524 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 PFKFB3Q16875 520 aaPredicted RBP8.58□□□□□ -1.04
LINC01961-201ENST00000449954 INAVAQ3KP66 663 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 C4orf17Q53FE4 359 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 C20orf194Q5TEA3 1177 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 CENPPQ6IPU0 288 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 APBB1IPQ7Z5R6 666 aaPredicted RBP8.58□□□□□ -1.04
LINC01961-201ENST00000449954 RAB11FIP4Q86YS3 637 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 NOSTRINQ8IVI9 506 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 ZBTB8OSQ8IWT0 167 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 DEFB119Q8N690 84 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 ZNF248Q8NDW4 579 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 ETNPPLQ8TBG4 499 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 SNRNP27Q8WVK2 155 aaKnown RBP8.58□□□□□ -1.04
LINC01961-201ENST00000449954 PGLYRP2Q96PD5 576 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 LXNQ9BS40 222 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 CRISPLD1Q9H336 500 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 GAREM1Q9H706 876 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 WRAP73Q9P2S5 460 aaPredicted RBP8.58□□□□□ -1.04
LINC01961-201ENST00000449954 SRPK3Q9UPE1 567 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 FNDC3AQ9Y2H6 1198 aaKnown RBP8.58□□□□□ -1.04
LINC01961-201ENST00000449954 PCDHGA1Q9Y5H4 931 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 NID2Q14112 1375 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 BSNQ9UPA5 3926 aa8.58□□□□□ -1.04
LINC01961-201ENST00000449954 ANK1P16157 1881 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 SMIM28A0A1B0GU29 152 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 MTMR11A4FU01 709 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 LRRIQ4A6NIV6 560 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 CCER2I3L3R5 266 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 OAZ2O95190 189 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 MARCKSP29966 332 aaPredicted RBP8.57□□□□□ -1.04
LINC01961-201ENST00000449954 EIF2DP41214 584 aaKnown RBP8.57□□□□□ -1.04
LINC01961-201ENST00000449954 YARSP54577 528 aaKnown RBP8.57□□□□□ -1.04
LINC01961-201ENST00000449954 FAM160A1Q05DH4 1040 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 SOX4Q06945 474 aaPredicted RBP8.57□□□□□ -1.04
LINC01961-201ENST00000449954 USP4Q13107 963 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 PRPF4BQ13523 1007 aaKnown RBP8.57□□□□□ -1.04
LINC01961-201ENST00000449954 UBAP2LQ14157 1087 aaKnown RBP8.57□□□□□ -1.04
LINC01961-201ENST00000449954 MYBPC2Q14324 1141 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 TAF12Q16514 161 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 RTN1Q16799 776 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 EML3Q32P44 896 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 TBC1D25Q3MII6 688 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 ARHGAP40Q5TG30 622 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 CDCA2Q69YH5 1023 aaPredicted RBP8.57□□□□□ -1.04
LINC01961-201ENST00000449954 APOA5Q6Q788 366 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 ATG14Q6ZNE5 492 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 ERICH1Q86X53 443 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 MAB21L3Q8N8X9 362 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 RIN3Q8TB24 985 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 ZNF419Q96HQ0 510 aaPredicted RBP8.57□□□□□ -1.04
LINC01961-201ENST00000449954 C22orf23Q9BZE7 217 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 C2orf40Q9H1Z8 148 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 IL25Q9H293 177 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 FZD8Q9H461 694 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 OSBPL3Q9H4L5 887 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 CALCOCO1Q9P1Z2 691 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 SEPT3Q9UH03 358 aa8.57□□□□□ -1.04
LINC01961-201ENST00000449954 ZNF638Q14966 1978 aaKnown RBP8.56□□□□□ -1.04
LINC01961-201ENST00000449954 CYP3A7-CYP3A51PA0A087WV96 503 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 EDIL3O43854 480 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 NDUFS2O75306 463 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 AFPP02771 609 aaKnown RBP8.56□□□□□ -1.04
LINC01961-201ENST00000449954 CR2P20023 1033 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
LINC01961-201ENST00000449954 CYP3A7P24462 503 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 OPRD1P41143 372 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 TUFMP49411 452 aaKnown RBP8.56□□□□□ -1.04
LINC01961-201ENST00000449954 PCBP4P57723 403 aaKnown RBP8.56□□□□□ -1.04
LINC01961-201ENST00000449954 MYO1EQ12965 1108 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 ZNF77Q15935 545 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 TSGA10IPQ3SY00 556 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 CCDC157Q569K6 752 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 XKR4Q5GH76 650 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 MOXD1Q6UVY6 613 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 SV2AQ7L0J3 742 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 TRMT11Q7Z4G4 463 aaKnown RBP8.56□□□□□ -1.04
LINC01961-201ENST00000449954 EFCAB13Q8IY85 973 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 CCDC148Q8NFR7 591 aa8.56□□□□□ -1.04
LINC01961-201ENST00000449954 NANOS1Q8WY41 292 aaKnown RBP8.56□□□□□ -1.04
LINC01961-201ENST00000449954 MRPS31Q92665 395 aaKnown RBP8.56□□□□□ -1.04
LINC01961-201ENST00000449954 ZSWIM4Q9H7M6 989 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms