RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 ATG4CQ96DT6 458 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 FAM167AQ96KS9 214 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 ZIM3Q96PE6 472 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 FNBP1Q96RU3 617 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 CEP89Q96ST8 783 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 CBWD1Q9BRT8 395 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 NTPCRQ9BSD7 190 aaKnown RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 CAPS2Q9BXY5 557 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 GPR88Q9GZN0 384 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 WNT10AQ9GZT5 417 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 MTFR1LQ9H019 292 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 TMEM117Q9H0C3 514 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 WNT8AQ9H1J5 351 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 BCAS3Q9H6U6 928 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 SMARCAL1Q9NZC9 954 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 EHD2Q9NZN4 543 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 SLAMF8Q9P0V8 285 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 GABBR1Q9UBS5 961 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 PARP2Q9UGN5 583 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 LCMT1Q9UIC8 334 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 GTF3C4Q9UKN8 822 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 MTUS1Q9ULD2 1270 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 NFU1Q9UMS0 254 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 PACSIN2Q9UNF0 486 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-208ENST00000447995 COQ4Q9Y3A0 265 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 CD2APQ9Y5K6 639 aa4.33□□□□□ -1.72
PTPN12-208ENST00000447995 DOCK1Q14185 1865 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 DNAJC25-GNG10A0A024R161 153 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 B8ZZF3 427 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 AGPSO00116 658 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 PODXLO00592 558 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 HNRNPDLO14979 420 aaKnown RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 SPOPO43791 374 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 EXTL3O43909 919 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 ATP9AO75110 1047 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 LRRN2O75325 713 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 LDHAP00338 332 aaKnown RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 PIGRP01833 764 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 FGGP02679 453 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 ESR1P03372 595 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 CYP1A2P05177 515 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 INHBBP09529 407 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 GLDCP23378 1020 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 TBXAS1P24557 533 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 CHRNA3P32297 505 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 ICAM3P32942 547 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 MAN1A1P33908 653 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 LIG4P49917 911 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 GUCY2FP51841 1108 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 AP3M2P53677 418 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 POLGP54098 1239 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 GYS2P54840 703 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 HMGCS2P54868 508 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 DRG2P55039 364 aaKnown RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 HNRNPH2P55795 449 aaKnown RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 EIF3BP55884 814 aaKnown RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 RNASE9P60153 205 aaKnown RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 PTENP60484 403 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 ACTR2P61160 394 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 DLG4P78352 724 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 DR1Q01658 176 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 CDR2Q01850 454 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 MAP2K1Q02750 393 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 PRPF4BQ13523 1007 aaKnown RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 EMC2Q15006 297 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 PSMD6Q15008 389 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 WIPI1Q5MNZ9 446 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 C1orf220Q5T0J3 134 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 NBPF12Q5TAG4 269 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 PRAMEF13Q5VWM6 474 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 FAM160B1Q5W0V3 765 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 PLA2G4FQ68DD2 849 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 SWSAP1Q6NVH7 229 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 LETMD1Q6P1Q0 360 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 ABHD15Q6UXT9 468 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 KDM7AQ6ZMT4 941 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 TRIM72Q6ZMU5 477 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 CATSPERGQ6ZRH7 1159 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 ANO5Q75V66 913 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 HOOK3Q86VS8 718 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 SPATS2Q86XZ4 545 aaKnown RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 ARHGEF19Q8IW93 802 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 IQCKQ8N0W5 287 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 MFSD2AQ8NA29 543 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 OLIG1Q8TAK6 271 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 RIN3Q8TB24 985 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 ABHD4Q8TB40 342 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 DEPTORQ8TB45 409 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 FBF1Q8TES7 1133 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 SEC14L1Q92503 715 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 CCDC127Q96BQ5 260 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 ZNF653Q96CK0 615 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 CCDC120Q96HB5 630 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 RNPC3Q96LT9 517 aaKnown RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 GDAP1L1Q96MZ0 367 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 ZSWIM1Q9BR11 485 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 DDX47Q9H0S4 455 aaKnown RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 THAP2Q9H0W7 228 aa4.32□□□□□ -1.72
PTPN12-208ENST00000447995 POLR3FQ9H1D9 316 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-208ENST00000447995 IKZF4Q9H2S9 585 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms