RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 DMAP1Q9NPF5 467 aaPredicted RBP20.62■□□□□ 0.89
SGCE-207ENST00000447873 FNIP2Q9P278 1114 aa20.62■□□□□ 0.89
SGCE-207ENST00000447873 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.61■□□□□ 0.89
SGCE-207ENST00000447873 MTMR11A4FU01 709 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 GRIK1P39086 918 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 NDUFV1P49821 464 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 CACNA2D1P54289 1103 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 ZNF662Q6ZS27 426 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 PIGZQ86VD9 579 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 ATAD1Q8NBU5 361 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 ZNF461Q8TAF7 563 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 C18orf8Q96DM3 657 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 SLC4A5Q9BY07 1137 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 MIS12Q9H081 205 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 CERS4Q9HA82 394 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 RXFP1Q9HBX9 757 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 CSNK1G1Q9HCP0 422 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 MYO1AQ9UBC5 1043 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 CNOT8Q9UFF9 292 aaKnown RBP20.61■□□□□ 0.89
SGCE-207ENST00000447873 STRIP2Q9ULQ0 834 aa20.61■□□□□ 0.89
SGCE-207ENST00000447873 GRM6O15303 877 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 CSPG5O95196 566 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 RRM1P23921 792 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 DNAJB1P25685 340 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 ARHGAP25P42331 645 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 PTP4A2Q12974 167 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 GPM6BQ13491 265 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 SMC1AQ14683 1233 aaKnown RBP20.6■□□□□ 0.89
SGCE-207ENST00000447873 CYP4A22Q5TCH4 519 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 VSTM1Q6UX27 236 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 MICAL1Q8TDZ2 1067 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 HSFY1Q96LI6 401 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 PRO3102Q9H379 93 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 NGRNQ9NPE2 291 aaKnown RBP20.6■□□□□ 0.89
SGCE-207ENST00000447873 CYLDQ9NQC7 956 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 TMEM30AQ9NV96 361 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 DUSP10Q9Y6W6 482 aa20.6■□□□□ 0.89
SGCE-207ENST00000447873 E5RJQ4 531 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 H3BNC9 293 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 PIK3R2O00459 728 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 TEX28O15482 410 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 ATMINO43313 823 aaPredicted RBP20.59■□□□□ 0.89
SGCE-207ENST00000447873 LPXNO60711 386 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 ABL1P00519 1130 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 ERBB2P04626 1255 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 ACADSBP45954 432 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 ADCY1Q08828 1119 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 RAB33AQ14088 237 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 PLPP4Q5VZY2 271 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 TPGS2Q68CL5 300 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 PHLDB2Q86SQ0 1253 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 SCN4BQ8IWT1 228 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 ZMIZ2Q8NF64 920 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 ARNTL2Q8WYA1 636 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 KCTD13Q8WZ19 329 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 ARHGEF26Q96DR7 871 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 EMILIN2Q9BXX0 1053 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 UBXN6Q9BZV1 441 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 TJP2Q9UDY2 1190 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 TRIM10Q9UDY6 481 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 AFF4Q9UHB7 1163 aaKnown RBP20.59■□□□□ 0.89
SGCE-207ENST00000447873 GUCA1BQ9UMX6 200 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 SLC27A5Q9Y2P5 690 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 IRAK3Q9Y616 596 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 ESPNB1AK53 854 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 F8VP50 259 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 ABLIM3O94929 683 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 CYP1A2P05177 515 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 CNPP09543 421 aaKnown RBP20.59■□□□□ 0.89
SGCE-207ENST00000447873 LCP1P13796 627 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 MAGEA11P43364 429 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 GABRB2P47870 512 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 SMAD3P84022 425 aaKnown RBP20.59■□□□□ 0.89
SGCE-207ENST00000447873 DUSP4Q13115 394 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 MGAT5BQ3V5L5 792 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 TMEM110Q86TL2 294 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 MRPL43Q8N983 215 aaKnown RBP20.59■□□□□ 0.89
SGCE-207ENST00000447873 TIFAQ96CG3 184 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 SEPT5Q99719 369 aaPredicted RBP20.59■□□□□ 0.89
SGCE-207ENST00000447873 LRRC4Q9HBW1 653 aa20.59■□□□□ 0.89
SGCE-207ENST00000447873 AVENQ9NQS1 362 aaPredicted RBP20.59■□□□□ 0.89
SGCE-207ENST00000447873 CHD7Q9P2D1 2997 aa20.58■□□□□ 0.89
SGCE-207ENST00000447873 MACROD2A1Z1Q3 448 aa20.58■□□□□ 0.88
SGCE-207ENST00000447873 BTNL10A8MVZ5 291 aa20.58■□□□□ 0.88
SGCE-207ENST00000447873 TRIM66O15016 1216 aa20.58■□□□□ 0.88
SGCE-207ENST00000447873 VNN2O95498 520 aa20.58■□□□□ 0.88
SGCE-207ENST00000447873 ADH1AP07327 375 aa20.58■□□□□ 0.88
SGCE-207ENST00000447873 RPL34P49207 117 aaKnown RBP20.58■□□□□ 0.88
SGCE-207ENST00000447873 NAP1L1P55209 391 aaKnown RBP20.58■□□□□ 0.88
SGCE-207ENST00000447873 RFFLQ8WZ73 363 aa20.58■□□□□ 0.88
SGCE-207ENST00000447873 CTTNBP2NLQ9P2B4 639 aa20.58■□□□□ 0.88
SGCE-207ENST00000447873 WDR35Q9P2L0 1181 aa20.58■□□□□ 0.88
SGCE-207ENST00000447873 NCANO14594 1321 aa20.57■□□□□ 0.88
SGCE-207ENST00000447873 A0A0A6YYK5 440 aaPredicted RBP20.57■□□□□ 0.88
SGCE-207ENST00000447873 C2orf71A6NGG8 1288 aa20.57■□□□□ 0.88
SGCE-207ENST00000447873 ATF2P15336 505 aa20.57■□□□□ 0.88
SGCE-207ENST00000447873 NOP2P46087 812 aaKnown RBP20.57■□□□□ 0.88
SGCE-207ENST00000447873 ADIGQ0VDE8 80 aa20.57■□□□□ 0.88
SGCE-207ENST00000447873 CAMK1Q14012 370 aa20.57■□□□□ 0.88
SGCE-207ENST00000447873 ZNF268Q14587 947 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms