RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 CCDC150Q8NCX0 1101 aa25.52■■□□□ 1.68
MRPL28-205ENST00000447696 CSGALNACT1Q8TDX6 532 aa25.52■■□□□ 1.68
MRPL28-205ENST00000447696 ELMO3Q96BJ8 720 aa25.52■■□□□ 1.68
MRPL28-205ENST00000447696 DHTKD1Q96HY7 919 aaPredicted RBP25.52■■□□□ 1.68
MRPL28-205ENST00000447696 FAXDC2Q96IV6 333 aa25.52■■□□□ 1.68
MRPL28-205ENST00000447696 NIF3L1Q9GZT8 377 aa25.52■■□□□ 1.68
MRPL28-205ENST00000447696 CYP3A43Q9HB55 503 aa25.52■■□□□ 1.68
MRPL28-205ENST00000447696 TDP1Q9NUW8 608 aa25.52■■□□□ 1.68
MRPL28-205ENST00000447696 THG1LQ9NWX6 298 aaKnown RBP25.52■■□□□ 1.68
MRPL28-205ENST00000447696 MAN1B1Q9UKM7 699 aa25.52■■□□□ 1.68
MRPL28-205ENST00000447696 PIAS3Q9Y6X2 628 aa25.52■■□□□ 1.68
MRPL28-205ENST00000447696 DENND4CQ5VZ89 1909 aa25.52■■□□□ 1.68
MRPL28-205ENST00000447696 COL4A3Q01955 1670 aa25.52■■□□□ 1.68
MRPL28-205ENST00000447696 NCAM2O15394 837 aa25.51■■□□□ 1.67
MRPL28-205ENST00000447696 CCNE1P24864 410 aa25.51■■□□□ 1.67
MRPL28-205ENST00000447696 PMS1P54277 932 aaKnown RBP25.51■■□□□ 1.67
MRPL28-205ENST00000447696 INCA1Q0VD86 236 aa25.51■■□□□ 1.67
MRPL28-205ENST00000447696 PUM1Q14671 1186 aaKnown RBP eCLIP25.51■■□□□ 1.67
MRPL28-205ENST00000447696 GPIHBP1Q8IV16 184 aa25.51■■□□□ 1.67
MRPL28-205ENST00000447696 CRYBG2Q8N1P7 616 aa25.51■■□□□ 1.67
MRPL28-205ENST00000447696 USP13Q92995 863 aaPredicted RBP25.51■■□□□ 1.67
MRPL28-205ENST00000447696 CLDN23Q96B33 292 aa25.51■■□□□ 1.67
MRPL28-205ENST00000447696 EEF2KMTQ96G04 330 aa25.51■■□□□ 1.67
MRPL28-205ENST00000447696 SMG9Q9H0W8 520 aaKnown RBP25.51■■□□□ 1.67
MRPL28-205ENST00000447696 PFKLP17858 780 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 TRIM21P19474 475 aaKnown RBP25.5■■□□□ 1.67
MRPL28-205ENST00000447696 CD72P21854 359 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 TARSP26639 723 aaKnown RBP25.5■■□□□ 1.67
MRPL28-205ENST00000447696 ANP32AP39687 249 aaKnown RBP25.5■■□□□ 1.67
MRPL28-205ENST00000447696 PPP3CCP48454 512 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 MXI1P50539 228 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 PDE6CP51160 858 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 NDST1P52848 882 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 UBE2HP62256 183 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 FOXR2Q6PJQ5 311 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 FAM35AQ86V20 835 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 RMDN1Q96DB5 314 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 C8orf33Q9H7E9 229 aaPredicted RBP25.5■■□□□ 1.67
MRPL28-205ENST00000447696 MMRN2Q9H8L6 949 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 APOBEC3GQ9HC16 384 aaKnown RBP25.5■■□□□ 1.67
MRPL28-205ENST00000447696 TMEM30AQ9NV96 361 aa25.5■■□□□ 1.67
MRPL28-205ENST00000447696 MTF2Q9Y483 593 aaPredicted RBP25.5■■□□□ 1.67
MRPL28-205ENST00000447696 TICRRQ7Z2Z1 1910 aa25.49■■□□□ 1.67
MRPL28-205ENST00000447696 TRAV19A0A0A6YYK7 116 aa25.49■■□□□ 1.67
MRPL28-205ENST00000447696 CLDN5O00501 218 aa25.49■■□□□ 1.67
MRPL28-205ENST00000447696 LRRN2O75325 713 aa25.49■■□□□ 1.67
MRPL28-205ENST00000447696 RPS9P46781 194 aaKnown RBP25.49■■□□□ 1.67
MRPL28-205ENST00000447696 CACNA2D1P54289 1103 aa25.49■■□□□ 1.67
MRPL28-205ENST00000447696 ACOT1Q86TX2 421 aa25.49■■□□□ 1.67
MRPL28-205ENST00000447696 FBXL13Q8NEE6 735 aa25.49■■□□□ 1.67
MRPL28-205ENST00000447696 SMARCD1Q96GM5 515 aa25.49■■□□□ 1.67
MRPL28-205ENST00000447696 TRPM5Q9NZQ8 1165 aa25.49■■□□□ 1.67
MRPL28-205ENST00000447696 GREB1Q4ZG55 1949 aa25.49■■□□□ 1.67
MRPL28-205ENST00000447696 MIA3Q5JRA6 1907 aa25.49■■□□□ 1.67
MRPL28-205ENST00000447696 TRIM49BA6NDI0 452 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 USP17L7P0C7H9 530 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 USP46P62068 366 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 MORC3Q14149 939 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 PAQR9Q6ZVX9 377 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 FUKQ8N0W3 1084 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 ZNF687Q8N1G0 1237 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 FAM3CQ92520 227 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 MED10Q9BTT4 135 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 TRPC7Q9HCX4 862 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 DMAP1Q9NPF5 467 aaPredicted RBP25.48■■□□□ 1.67
MRPL28-205ENST00000447696 GCNT4Q9P109 453 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 HMGXB4Q9UGU5 601 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 CCL26Q9Y258 94 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 KIF26AQ9ULI4 1882 aaPredicted RBP25.48■■□□□ 1.67
MRPL28-205ENST00000447696 F5P12259 2224 aa25.48■■□□□ 1.67
MRPL28-205ENST00000447696 RTN3O95197 1032 aaPredicted RBP25.47■■□□□ 1.67
MRPL28-205ENST00000447696 CKMP06732 381 aa25.47■■□□□ 1.67
MRPL28-205ENST00000447696 KPNA1P52294 538 aaPredicted RBP25.47■■□□□ 1.67
MRPL28-205ENST00000447696 C1orf210Q8IVY1 113 aa25.47■■□□□ 1.67
MRPL28-205ENST00000447696 TTC39CQ8N584 583 aa25.47■■□□□ 1.67
MRPL28-205ENST00000447696 ZFYVE19Q96K21 471 aa25.47■■□□□ 1.67
MRPL28-205ENST00000447696 CEP63Q96MT8 703 aa25.47■■□□□ 1.67
MRPL28-205ENST00000447696 DNAI2Q9GZS0 605 aa25.47■■□□□ 1.67
MRPL28-205ENST00000447696 FAM124BQ9H5Z6 455 aaPredicted RBP25.47■■□□□ 1.67
MRPL28-205ENST00000447696 RAB20Q9NX57 234 aa25.47■■□□□ 1.67
MRPL28-205ENST00000447696 ARMCX3Q9UH62 379 aaPredicted RBP25.47■■□□□ 1.67
MRPL28-205ENST00000447696 CD44P16070 742 aaKnown RBP25.46■■□□□ 1.67
MRPL28-205ENST00000447696 BMP6P22004 513 aa25.46■■□□□ 1.67
MRPL28-205ENST00000447696 DCAF17Q5H9S7 520 aaPredicted RBP25.46■■□□□ 1.67
MRPL28-205ENST00000447696 TCERG1LQ5VWI1 586 aa25.46■■□□□ 1.67
MRPL28-205ENST00000447696 ISM2Q6H9L7 571 aa25.46■■□□□ 1.67
MRPL28-205ENST00000447696 RALGPS2Q86X27 583 aaPredicted RBP25.46■■□□□ 1.67
MRPL28-205ENST00000447696 KIAA2013Q8IYS2 634 aa25.46■■□□□ 1.67
MRPL28-205ENST00000447696 NUP93Q8N1F7 819 aa25.46■■□□□ 1.67
MRPL28-205ENST00000447696 RUBCNQ92622 972 aa25.46■■□□□ 1.67
MRPL28-205ENST00000447696 SEMA4DQ92854 862 aa25.46■■□□□ 1.67
MRPL28-205ENST00000447696 SLITRK1Q96PX8 696 aa25.46■■□□□ 1.67
MRPL28-205ENST00000447696 FAM83CQ9BQN1 747 aa25.46■■□□□ 1.67
MRPL28-205ENST00000447696 NT5C1AQ9BXI3 368 aa25.46■■□□□ 1.67
MRPL28-205ENST00000447696 METTL14Q9HCE5 456 aaKnown RBP25.46■■□□□ 1.67
MRPL28-205ENST00000447696 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.46■■□□□ 1.672e-6■■■■■ 69.6
MRPL28-205ENST00000447696 KRT82Q9NSB4 513 aa25.46■■□□□ 1.67
MRPL28-205ENST00000447696 BICDL2A1A5D9 508 aa25.45■■□□□ 1.66
MRPL28-205ENST00000447696 C2orf78A6NCI8 922 aa25.45■■□□□ 1.66
MRPL28-205ENST00000447696 ZNF840PA6NDX5 716 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms