RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 NOL4O94818 638 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 ADORA2BP29275 332 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 MRE11P49959 708 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 CACNA2D1P54289 1103 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 KCNJ12Q14500 433 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 MAN2A1Q16706 1144 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 POTEHQ6S545 545 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 DENND5BQ6ZUT9 1274 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 FUKQ8N0W3 1084 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 CEP295NLQ96MC4 621 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 PHOX2BQ99453 314 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 CRACR2AQ9BSW2 395 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 ARHGEF3Q9NR81 526 aa25.41■■□□□ 1.66
C9orf3-207ENST00000445181 PES1O00541 588 aaKnown RBP25.4■■□□□ 1.66
C9orf3-207ENST00000445181 CYP4F8P98187 520 aa25.4■■□□□ 1.66
C9orf3-207ENST00000445181 GPR158Q5T848 1215 aa25.4■■□□□ 1.66
C9orf3-207ENST00000445181 PAQR9Q6ZVX9 377 aa25.4■■□□□ 1.66
C9orf3-207ENST00000445181 LMO3Q8TAP4 145 aa25.4■■□□□ 1.66
C9orf3-207ENST00000445181 ATOH1Q92858 354 aaPredicted RBP25.4■■□□□ 1.66
C9orf3-207ENST00000445181 CYFIP2Q96F07 1278 aa25.4■■□□□ 1.66
C9orf3-207ENST00000445181 TRMT2BQ96GJ1 504 aaKnown RBP25.4■■□□□ 1.66
C9orf3-207ENST00000445181 TMEM176AQ96HP8 235 aa25.4■■□□□ 1.66
C9orf3-207ENST00000445181 ZSWIM3Q96MP5 696 aa25.4■■□□□ 1.66
C9orf3-207ENST00000445181 TUBGCP2Q9BSJ2 902 aa25.4■■□□□ 1.66
C9orf3-207ENST00000445181 TBC1D17Q9HA65 648 aa25.4■■□□□ 1.66
C9orf3-207ENST00000445181 IL21Q9HBE4 155 aa25.4■■□□□ 1.66
C9orf3-207ENST00000445181 DMAP1Q9NPF5 467 aaPredicted RBP25.4■■□□□ 1.66
C9orf3-207ENST00000445181 EHD2Q9NZN4 543 aa25.4■■□□□ 1.66
C9orf3-207ENST00000445181 FAM200BP0CF97 657 aa25.39■■□□□ 1.66
C9orf3-207ENST00000445181 FAM78AQ5JUQ0 283 aa25.39■■□□□ 1.66
C9orf3-207ENST00000445181 STXBP5Q5T5C0 1151 aa25.39■■□□□ 1.66
C9orf3-207ENST00000445181 GBP6Q6ZN66 633 aa25.39■■□□□ 1.66
C9orf3-207ENST00000445181 RRAGAQ7L523 313 aa25.39■■□□□ 1.66
C9orf3-207ENST00000445181 ZSCAN18Q8TBC5 510 aaPredicted RBP25.39■■□□□ 1.66
C9orf3-207ENST00000445181 MYRFLQ96LU7 910 aa25.39■■□□□ 1.66
C9orf3-207ENST00000445181 KCNK16Q96T55 309 aa25.39■■□□□ 1.66
C9orf3-207ENST00000445181 NAT10Q9H0A0 1025 aaKnown RBP25.39■■□□□ 1.66
C9orf3-207ENST00000445181 FAM86C1Q9NVL1 165 aa25.39■■□□□ 1.66
C9orf3-207ENST00000445181 ECI2O75521 394 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 LETM1O95202 739 aaPredicted RBP25.38■■□□□ 1.65
C9orf3-207ENST00000445181 EEF1GP26641 437 aaKnown RBP25.38■■□□□ 1.65
C9orf3-207ENST00000445181 RAD23BP54727 409 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 MYL5Q02045 173 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 IFRD2Q12894 506 aaPredicted RBP25.38■■□□□ 1.65
C9orf3-207ENST00000445181 VWA3BQ502W6 1294 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 TCP11X2Q5H9J9 407 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 TANGO2Q6ICL3 276 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 PHLDB3Q6NSJ2 640 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 ARHGEF19Q8IW93 802 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 SLC4A11Q8NBS3 891 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 MRPS31Q92665 395 aaKnown RBP25.38■■□□□ 1.65
C9orf3-207ENST00000445181 SMARCD2Q92925 531 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 ASB16Q96NS5 453 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 HNRNPABQ99729 332 aaKnown RBP25.38■■□□□ 1.65
C9orf3-207ENST00000445181 PLA2G2FQ9BZM2 168 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 NDST4Q9H3R1 872 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 ZFP14Q9HCL3 533 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 TMEM30AQ9NV96 361 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 PCDHB4Q9Y5E5 795 aa25.38■■□□□ 1.65
C9orf3-207ENST00000445181 F11P03951 625 aa25.37■■□□□ 1.65
C9orf3-207ENST00000445181 MAP3K7CLP57077 242 aa25.37■■□□□ 1.65
C9orf3-207ENST00000445181 GCNT1Q02742 428 aa25.37■■□□□ 1.65
C9orf3-207ENST00000445181 EXOC3L4Q17RC7 722 aa25.37■■□□□ 1.65
C9orf3-207ENST00000445181 ANO6Q4KMQ2 910 aa25.37■■□□□ 1.65
C9orf3-207ENST00000445181 TASP1Q9H6P5 420 aa25.37■■□□□ 1.65
C9orf3-207ENST00000445181 TPM2P07951 284 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 USP46P62068 366 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 PPP1R26Q5T8A7 1209 aaPredicted RBP25.36■■□□□ 1.65
C9orf3-207ENST00000445181 TMEM270Q6UE05 265 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 TMEM150AQ86TG1 271 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 CCDC105Q8IYK2 499 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 NUP93Q8N1F7 819 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 DTWD2Q8NBA8 298 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 KAT5Q92993 513 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 ELSPBP1Q96BH3 223 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 SHDQ96IW2 340 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 UBE2TQ9NPD8 197 aaPredicted RBP25.36■■□□□ 1.65
C9orf3-207ENST00000445181 FANCLQ9NW38 375 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 MYH10P35580 1976 aa25.36■■□□□ 1.65
C9orf3-207ENST00000445181 GTPBP10A4D1E9 387 aaKnown RBP25.35■■□□□ 1.65
C9orf3-207ENST00000445181 RTN3O95197 1032 aaPredicted RBP25.35■■□□□ 1.65
C9orf3-207ENST00000445181 CD19P15391 556 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 SLC9A1P19634 815 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 DDX6P26196 483 aaKnown RBP eCLIP25.35■■□□□ 1.65
C9orf3-207ENST00000445181 PFKPQ01813 784 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 SKOR2Q2VWA4 1001 aaPredicted RBP25.35■■□□□ 1.65
C9orf3-207ENST00000445181 SLC44A4Q53GD3 710 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 TRIM65Q6PJ69 517 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 UBR7Q8N806 425 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 MAB21L3Q8N8X9 362 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 JAKMIP2Q96AA8 810 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 SMOQ99835 787 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 TRPC7Q9HCX4 862 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 TAB2Q9NYJ8 693 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 ZMYM5Q9UJ78 669 aa25.35■■□□□ 1.65
C9orf3-207ENST00000445181 BEST1O76090 585 aa25.34■■□□□ 1.65
C9orf3-207ENST00000445181 FCARP24071 287 aa25.34■■□□□ 1.65
C9orf3-207ENST00000445181 VIPR2P41587 438 aa25.34■■□□□ 1.65
C9orf3-207ENST00000445181 SLC5A3P53794 718 aa25.34■■□□□ 1.65
C9orf3-207ENST00000445181 STARD6P59095 220 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms