RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 NIF3L1Q9GZT8 377 aa11.9□□□□□ -0.5
PRKD3-203ENST00000443187 KCNH6Q9H252 994 aa11.9□□□□□ -0.5
PRKD3-203ENST00000443187 FAM49BQ9NUQ9 324 aa11.9□□□□□ -0.5
PRKD3-203ENST00000443187 FAM86C1Q9NVL1 165 aa11.9□□□□□ -0.5
PRKD3-203ENST00000443187 RAB20Q9NX57 234 aa11.9□□□□□ -0.5
PRKD3-203ENST00000443187 GCNT4Q9P109 453 aa11.9□□□□□ -0.5
PRKD3-203ENST00000443187 KIAA1468Q9P260 1216 aa11.9□□□□□ -0.5
PRKD3-203ENST00000443187 COQ4Q9Y3A0 265 aa11.9□□□□□ -0.5
PRKD3-203ENST00000443187 USP34Q70CQ2 3546 aa11.9□□□□□ -0.51
PRKD3-203ENST00000443187 ZNF638Q14966 1978 aaKnown RBP11.89□□□□□ -0.51
PRKD3-203ENST00000443187 KANSL1LA0AUZ9 987 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 OTOL1A6NHN0 477 aaPredicted RBP11.89□□□□□ -0.51
PRKD3-203ENST00000443187 CILPO75339 1184 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 PFKPQ01813 784 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 PRKCQQ04759 706 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 TCERG1LQ5VWI1 586 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 FILIP1Q7Z7B0 1213 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 UNC93AQ86WB7 457 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 ARL14EPQ8N8R7 260 aaPredicted RBP11.89□□□□□ -0.51
PRKD3-203ENST00000443187 DTWD2Q8NBA8 298 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 SCAMP5Q8TAC9 235 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 SLC2A14Q8TDB8 520 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 MRPS31Q92665 395 aaKnown RBP11.89□□□□□ -0.51
PRKD3-203ENST00000443187 IRF7Q92985 503 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 CHFRQ96EP1 664 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 GCNAQ96QF7 691 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 TRPC7Q9HCX4 862 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 LTB4R2Q9NPC1 389 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 TRPV5Q9NQA5 729 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 KRT82Q9NSB4 513 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 LMBRD1Q9NUN5 540 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 OBP2AQ9NY56 170 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 GTSE1Q9NYZ3 720 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 ARMCX3Q9UH62 379 aaPredicted RBP11.89□□□□□ -0.51
PRKD3-203ENST00000443187 SIT1Q9Y3P8 196 aa11.89□□□□□ -0.51
PRKD3-203ENST00000443187 ZNF840PA6NDX5 716 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 HHLA1C9JL84 531 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 ZNF263O14978 683 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 TRIM66O15016 1216 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 CHADO15335 359 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 AP1G2O75843 785 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 P4HA1P13674 534 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 DDX6P26196 483 aaKnown RBP eCLIP11.88□□□□□ -0.51
PRKD3-203ENST00000443187 ANXA13P27216 316 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 IFRD2Q12894 506 aaPredicted RBP11.88□□□□□ -0.51
PRKD3-203ENST00000443187 TAF10Q12962 218 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 STIM1Q13586 685 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 UBXN2BQ14CS0 331 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 ZNF394Q53GI3 561 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 TRIM68Q6AZZ1 485 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 TXNDC11Q6PKC3 985 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 GPRIN1Q7Z2K8 1008 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 CELF5Q8N6W0 485 aaKnown RBP11.88□□□□□ -0.51
PRKD3-203ENST00000443187 BPIFB1Q8TDL5 484 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 E2F7Q96AV8 911 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 FAM122AQ96E09 287 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 TNIP3Q96KP6 325 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 CEP63Q96MT8 703 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 MED10Q9BTT4 135 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 GTPBP4Q9BZE4 634 aaKnown RBP11.88□□□□□ -0.51
PRKD3-203ENST00000443187 RNF38Q9H0F5 515 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 CLSTN2Q9H4D0 955 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 CYP3A43Q9HB55 503 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 HPS4Q9NQG7 708 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 TDP1Q9NUW8 608 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 IL37Q9NZH6 218 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 UXTQ9UBK9 157 aaPredicted RBP11.88□□□□□ -0.51
PRKD3-203ENST00000443187 PIAS3Q9Y6X2 628 aa11.88□□□□□ -0.51
PRKD3-203ENST00000443187 FAM170BA6NMN3 283 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 DPYSL4O14531 572 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 ARSAP15289 507 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 ADORA2BP29275 332 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 AVPR1AP37288 418 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 FMO5P49326 533 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 SLC5A3P53794 718 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 RAD23BP54727 409 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 PTPN5P54829 565 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 MAP3K7CLP57077 242 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 LRMPQ12912 555 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 PAK1Q13153 545 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 ZNF77Q15935 545 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 FOXR2Q6PJQ5 311 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 CLEC20AQ6ZU45 233 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 FRMD5Q7Z6J6 570 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 TRIM59Q8IWR1 403 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 YAF2Q8IY57 180 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 MAML2Q8IZL2 1156 aaPredicted RBP11.87□□□□□ -0.51
PRKD3-203ENST00000443187 NUP93Q8N1F7 819 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 UBR7Q8N806 425 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 SLC4A11Q8NBS3 891 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 LMO3Q8TAP4 145 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 KAT5Q92993 513 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 SMARCD1Q96GM5 515 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 SHDQ96IW2 340 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 CEP295NLQ96MC4 621 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 HNRNPABQ99729 332 aaKnown RBP11.87□□□□□ -0.51
PRKD3-203ENST00000443187 FAM83CQ9BQN1 747 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 NT5C1AQ9BXI3 368 aa11.87□□□□□ -0.51
PRKD3-203ENST00000443187 SRRTQ9BXP5 876 aaKnown RBP11.87□□□□□ -0.51
PRKD3-203ENST00000443187 IMPG2Q9BZV3 1241 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms