RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CXorf38Q8TB03 319 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 FAXDC2Q96IV6 333 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 SLITRK1Q96PX8 696 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 PRMT1Q99873 361 aaKnown RBP14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 FAM129AQ9BZQ8 928 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 UPF3AQ9H1J1 476 aaKnown RBP14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 RNF186Q9NXI6 227 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 DNPEPQ9ULA0 475 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 NEU2Q9Y3R4 380 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 HES2Q9Y543 173 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 RALGAPA2Q2PPJ7 1873 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 DNAH12Q6ZR08 3092 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 LSM8O95777 96 aaKnown RBP14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 WDR72Q3MJ13 1102 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 ZNF667Q5HYK9 610 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 IZUMO3Q5VZ72 239 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 APBB1IPQ7Z5R6 666 aaPredicted RBP14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 CCDC197Q8NCU1 140 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 CXCL16Q9H2A7 254 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 KDM4CQ9H3R0 1056 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 SPC25Q9HBM1 224 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 ABCF3Q9NUQ8 709 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 SNTG2Q9NY99 539 aa14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 PIN4Q9Y237 131 aaKnown RBP14.59□□□□□ -0.07
PTCHD3-201ENST00000438700 TCRBV5S1A1TA0A578 114 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 DNAJC8O75937 253 aaPredicted RBP14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 TTC4O95801 387 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 ZSCAN5DPP0CG00 497 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 CCND3P30281 292 aaPredicted RBP14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 POLR2BP30876 1174 aaKnown RBP14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 NAA25Q14CX7 972 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 PCBP1Q15365 356 aaKnown RBP eCLIP14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 SMTNL2Q2TAL5 461 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 P3H1Q32P28 736 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 NBPF20Q3BBV1 942 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 DENND1BQ6P3S1 775 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 CCDC89Q8N998 374 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 ATXN2LQ8WWM7 1075 aaKnown RBP14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 KIF12Q96FN5 646 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 C9orf72Q96LT7 481 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 HOMER3Q9NSC5 361 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 C2CD2Q9Y426 696 aa14.58□□□□□ -0.07
PTCHD3-201ENST00000438700 LRRD1A4D1F6 860 aa14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 NEBLO76041 1014 aa14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 PRKAR2AP13861 404 aaKnown RBP14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 ETS1P14921 441 aa14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 CREB1P16220 341 aa14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 MYO1EQ12965 1108 aa14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 PTPN20Q4JDL3 420 aa14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 PPP1R2P3Q6NXS1 205 aa14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 TMEM109Q9BVC6 243 aa14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 TRIM6Q9C030 488 aaPredicted RBP14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 NXF3Q9H4D5 531 aaKnown RBP14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 XPNPEP3Q9NQH7 507 aa14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 INTS9Q9NV88 658 aaKnown RBP14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 HMGXB4Q9UGU5 601 aa14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 ZNF148Q9UQR1 794 aa14.58□□□□□ -0.08
PTCHD3-201ENST00000438700 HTTP42858 3142 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 GBP2P32456 591 aaPredicted RBP14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 CETN2P41208 172 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 CRYBB1P53674 252 aaPredicted RBP14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 KCNJ2P63252 427 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 EXOC3L1Q86VI1 746 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 RCOR2Q8IZ40 523 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 MGARPQ8TDB4 240 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 RBM41Q96IZ5 413 aaKnown RBP14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 DPP3Q9NY33 737 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 NINJ2Q9NZG7 142 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 TBK1Q9UHD2 729 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 GTF2IRD1Q9UHL9 959 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 CYTH4Q9UIA0 394 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 HGSO14964 777 aaPredicted RBP14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 LIASO43766 372 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 ADAMTS4O75173 837 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 TRPA1O75762 1119 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 KLRC2P26717 231 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 RFC1P35251 1148 aaPredicted RBP14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 LRRC14Q15048 493 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 FAM47CQ5HY64 1035 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 KCNT1Q5JUK3 1230 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 TAF2Q6P1X5 1199 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 SPOCD1Q6ZMY3 1216 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 CROCCP2Q86T23 111 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 NME8Q8N427 588 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 CCDC63Q8NA47 563 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 NSMCE1Q8WV22 266 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 PRCCQ92733 491 aaPredicted RBP14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 SNX27Q96L92 541 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 APOL6Q9BWW8 343 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 BCO2Q9BYV7 579 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 STMN4Q9H169 189 aaPredicted RBP14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 SMYD3Q9H7B4 428 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 ITGA11Q9UKX5 1188 aa14.57□□□□□ -0.08
PTCHD3-201ENST00000438700 A8MUI8 341 aa14.56□□□□□ -0.08
PTCHD3-201ENST00000438700 TJP3O95049 919 aa14.56□□□□□ -0.08
PTCHD3-201ENST00000438700 VIMP08670 466 aaKnown RBP14.56□□□□□ -0.08
PTCHD3-201ENST00000438700 AXLP30530 894 aa14.56□□□□□ -0.08
PTCHD3-201ENST00000438700 YWHAEP62258 255 aaKnown RBP14.56□□□□□ -0.08
PTCHD3-201ENST00000438700 DYNLT1P63172 113 aa14.56□□□□□ -0.08
PTCHD3-201ENST00000438700 TNFAIP8L3Q5GJ75 292 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms