RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 LBHD1Q9BQE6 289 aaPredicted RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 LPIN3Q9BQK8 851 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 TMEM175Q9BSA9 504 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 DESI2Q9BSY9 194 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 COLEC11Q9BWP8 271 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 TANC1Q9C0D5 1861 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 DPEP3Q9H4B8 488 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 DMGDHQ9UI17 866 aaKnown RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 BARX2Q9UMQ3 279 aaPredicted RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 STXBP5LQ9Y2K9 1186 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 FAN1Q9Y2M0 1017 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 PRG3Q9Y2Y8 225 aaPredicted RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 TIMM13Q9Y5L4 95 aaPredicted RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 MRPL42Q9Y6G3 142 aaKnown RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 COL4A6Q14031 1691 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 BRCA2P51587 3418 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 A0A0U1RQJ8 604 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 USP27XA6NNY8 438 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 A8MXQ7 604 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 NT5C1B-RDH14C9J2C7 533 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 NRDCO43847 1150 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 ATP2C2O75185 946 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 TADA2AO75478 443 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 GJB5O95377 273 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 CYP11A1P05108 521 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 PDGFRBP09619 1106 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 LINC00271P0C7V0 271 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 TNFAIP3P21580 790 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 CYLC1P35663 651 aaPredicted RBP7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 IDH3AP50213 366 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 PDE6CP51160 858 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 ARSDP51689 593 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 BCAR1P56945 870 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 BTG3Q14201 252 aaPredicted RBP7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 BMS1Q14692 1282 aaKnown RBP7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 SLC18A3Q16572 532 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 C9orf50Q5SZB4 431 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 PDE12Q6L8Q7 609 aaKnown RBP7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 ACOT1Q86TX2 421 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 ZSCAN30Q86W11 494 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 DNAAF5Q86Y56 855 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 HERC6Q8IVU3 1022 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 CRYBG2Q8N1P7 616 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 TMEM86AQ8N2M4 240 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 PHOSPHO2Q8TCD6 241 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 ZNF606Q8WXB4 792 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 ATRIPQ8WXE1 791 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 HEXIM2Q96MH2 286 aaKnown RBP7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 RTP3Q9BQQ7 232 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 NT5C1AQ9BXI3 368 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 GPR62Q9BZJ7 368 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 SNX25Q9H3E2 840 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 DEF6Q9H4E7 631 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 KCND1Q9NSA2 647 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 TAS2R14Q9NYV8 317 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 NAGPAQ9UK23 515 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 ADAM28Q9UKQ2 775 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 KIAA1257Q9ULG3 409 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 TFR2Q9UP52 801 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 PPP2R2CQ9Y2T4 447 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 PCDHA13Q9Y5I0 950 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 SLC4A7Q9Y6M7 1214 aa7.47□□□□□ -1.21
LSM3P3-201ENST00000436601 FAM170AA1A519 330 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 O00370 1275 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 THAP12O43422 761 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 TRAPPC3O43617 180 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 OAZ2O95190 189 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 CYP1A1P04798 512 aaPredicted RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 VDRP11473 427 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 ODC1P11926 461 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 UNGP13051 313 aaPredicted RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 CD19P15391 556 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 ATP2A2P16615 1042 aaKnown RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 PTPN1P18031 435 aaKnown RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 TYMPP19971 482 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 FGFR3P22607 806 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 ACAT1P24752 427 aaKnown RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 TKTP29401 623 aaKnown RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 ARHGAP25P42331 645 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 MAGEA10P43363 369 aaPredicted RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 LHX1P48742 406 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 ALDH7A1P49419 539 aaKnown RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 KRT83P78385 493 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 SHHQ15465 462 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 SPA17Q15506 151 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 CNGA2Q16280 664 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 CCDC142Q17RM4 750 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 CLEC16AQ2KHT3 1053 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 CCDC122Q5T0U0 273 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 DENND1BQ6P3S1 775 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 ALKBH5Q6P6C2 394 aaKnown RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 KCNT2Q6UVM3 1135 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 TAS1R1Q7RTX1 841 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 METTL23Q86XA0 190 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 ZNF677Q86XU0 584 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 REXO1L1PQ8IX06 675 aa7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 RNF168Q8IYW5 571 aaPredicted RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 CCAR2Q8N163 923 aaKnown RBP7.46□□□□□ -1.22
LSM3P3-201ENST00000436601 LINC00528Q8N1L1 170 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms