RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 CFIP05156 583 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
LINC00271-202ENST00000436554 PLCG1P19174 1290 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 ADSSP30520 456 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 RDXP35241 583 aaKnown RBP12.39□□□□□ -0.43
LINC00271-202ENST00000436554 ATXN3P54252 364 aaPredicted RBP12.39□□□□□ -0.43
LINC00271-202ENST00000436554 WNT7BP56706 349 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 DHCR24Q15392 516 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 CFAP221Q4G0U5 840 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 RILPL1Q5EBL4 403 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 LYSMD4Q5XG99 296 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 C19orf48Q6RUI8 117 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 FILIP1Q7Z7B0 1213 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 NT5DC4Q86YG4 428 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 PGBD3Q8N328 593 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 HDDC3Q8N4P3 179 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 CSGALNACT2Q8N6G5 542 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 C1orf127Q8N9H9 656 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 HMGB4Q8WW32 186 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 POMGNT1Q8WZA1 660 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 ZSCAN31Q96LW9 406 aaPredicted RBP12.39□□□□□ -0.43
LINC00271-202ENST00000436554 PNKPQ96T60 521 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 RNF38Q9H0F5 515 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 POLMQ9NP87 494 aaPredicted RBP12.39□□□□□ -0.43
LINC00271-202ENST00000436554 ZDHHC4Q9NPG8 344 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 BCCIPQ9P287 314 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC00271-202ENST00000436554 SLC6A14Q9UN76 642 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 ANK1P16157 1881 aa12.39□□□□□ -0.43
LINC00271-202ENST00000436554 ANKRD11Q6UB99 2663 aaPredicted RBP12.39□□□□□ -0.43
LINC00271-202ENST00000436554 ATXN2Q99700 1313 aaKnown RBP12.38□□□□□ -0.43
LINC00271-202ENST00000436554 A0A0A0MRY4 1105 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 FAM221BA6H8Z2 402 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 H0Y626 953 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 SCAMP3O14828 347 aaKnown RBP12.38□□□□□ -0.43
LINC00271-202ENST00000436554 ADAM23O75077 832 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 KAT7O95251 611 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 TRIM16O95361 564 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 APODP05090 189 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 CYP17A1P05093 508 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 ITGB3P05106 788 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 ABCD1P33897 745 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 UBA7P41226 1012 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 LHX1P48742 406 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 PDE6CP51160 858 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 GFPT1Q06210 699 aaPredicted RBP12.38□□□□□ -0.43
LINC00271-202ENST00000436554 BYSLQ13895 437 aaKnown RBP12.38□□□□□ -0.43
LINC00271-202ENST00000436554 POSTNQ15063 836 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 DUOXA1Q1HG43 343 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 SPDYCQ5MJ68 293 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 EOGTQ5NDL2 527 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 ARL6IP4Q66PJ3 421 aaKnown RBP12.38□□□□□ -0.43
LINC00271-202ENST00000436554 LMBRD2Q68DH5 695 aaPredicted RBP12.38□□□□□ -0.43
LINC00271-202ENST00000436554 FAM171BQ6P995 826 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 RHBDF2Q6PJF5 856 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 ZNF720Q7Z2F6 126 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 TMEM86AQ8N2M4 240 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 ZSWIM2Q8NEG5 633 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 SPATA18Q8TC71 538 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 CACTINQ8WUQ7 758 aaKnown RBP12.38□□□□□ -0.43
LINC00271-202ENST00000436554 CALML4Q96GE6 196 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 FAM84AQ96KN4 292 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 FAM213AQ9BRX8 229 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 SMPD4Q9NXE4 827 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 GDAP2Q9NXN4 497 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 TRPM5Q9NZQ8 1165 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 MAGEC2Q9UBF1 373 aaPredicted RBP12.38□□□□□ -0.43
LINC00271-202ENST00000436554 SNX9Q9Y5X1 595 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 DENND4CQ5VZ89 1909 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 MYH11P35749 1972 aa12.38□□□□□ -0.43
LINC00271-202ENST00000436554 FREM2Q5SZK8 3169 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 TCRBV21S2A2A0A5A6 115 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 ZNF840PA6NDX5 716 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 GABRDO14764 452 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 OPHN1O60890 802 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 TBCAO75347 108 aaKnown RBP12.37□□□□□ -0.43
LINC00271-202ENST00000436554 CD2BP2O95400 341 aaKnown RBP12.37□□□□□ -0.43
LINC00271-202ENST00000436554 KRT19P08727 400 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 BDNFP23560 247 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 LMO2P25791 158 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 PCSK1P29120 753 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 GRIK1P39086 918 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 DPP6P42658 865 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 MAGEA11P43364 429 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 KIR2DL1P43626 348 aaPredicted RBP12.37□□□□□ -0.43
LINC00271-202ENST00000436554 USP46P62068 366 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 SCAPQ12770 1279 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 SOWAHAQ2M3V2 549 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 HSF5Q4G112 596 aaPredicted RBP12.37□□□□□ -0.43
LINC00271-202ENST00000436554 C12orf40Q86WS4 652 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 PROSER1Q86XN7 944 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 ADGRF2Q8IZF7 708 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 TOP6BLQ8N6T0 577 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 OR2I1PQ8NGU4 316 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 CEP76Q8TAP6 659 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 CXorf38Q8TB03 319 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 RAD54LQ92698 747 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 FUBP3Q96I24 572 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC00271-202ENST00000436554 SPATA17Q96L03 361 aa12.37□□□□□ -0.43
LINC00271-202ENST00000436554 AK8Q96MA6 479 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms