RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 WDR4P57081 412 aaKnown RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 ROR1Q01973 937 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 RNASELQ05823 741 aaKnown RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 ARHGAP1Q07960 439 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 BNIP1Q12981 228 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 PDK2Q15119 407 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 PKN2Q16513 984 aaKnown RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 PDK4Q16654 411 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 Q3C1V9 767 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 FAM133BQ5BKY9 247 aaKnown RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 TMEM63BQ5T3F8 832 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 FAM102AQ5T9C2 384 aaPredicted RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 LCLAT1Q6UWP7 414 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 C4orf22Q6V702 233 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 VSIG1Q86XK7 387 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 PALM2Q8IXS6 379 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 TMEM192Q8IY95 271 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 CXorf38Q8TB03 319 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 LRRC8CQ8TDW0 803 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 USP6NLQ92738 828 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 ACAP3Q96P50 834 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 FDXACB1Q9BRP7 624 aaPredicted RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 ACSS3Q9H6R3 686 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 ECT2Q9H8V3 914 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 IFT122Q9HBG6 1241 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 TXNRD2Q9NNW7 524 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 MLXIPLQ9NP71 852 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 RABGEF1Q9UJ41 708 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 PNMA3Q9UL41 463 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 AGAP1Q9UPQ3 857 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 AKT3Q9Y243 479 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 DERAQ9Y315 318 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 RBM47A0AV96 593 aaKnown RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 SPAG7O75391 227 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 GJB1P08034 283 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 CA4P22748 312 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 ALDH3A1P30838 453 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 MSH2P43246 934 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 GPX6P59796 221 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 NCALDP61601 193 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 IGBP1P78318 339 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 CCNA1P78396 465 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 DPYSL3Q14195 570 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 FASTKD3Q14CZ7 662 aaKnown RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 SETDB1Q15047 1291 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 NOMO1Q15155 1222 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 ZKSCAN8Q15776 578 aaPredicted RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 SMTNL2Q2TAL5 461 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 SLC10A6Q3KNW5 377 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 DCAF4L1Q3SXM0 396 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 BOLA3Q53S33 107 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 KCNT1Q5JUK3 1230 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 OR6B2Q6IFH4 312 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 ADGRD1Q6QNK2 874 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 ARMCX2Q7L311 632 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 CDR2LQ86X02 465 aaPredicted RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 EMC1Q8N766 993 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 FBF1Q8TES7 1133 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 TEKT4Q8WW24 435 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 HSPH1Q92598 858 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 ZNF668Q96K58 619 aaPredicted RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 TWNKQ96RR1 684 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 PAIP2Q9BPZ3 127 aaKnown RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 TACO1Q9BSH4 297 aaKnown RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 DHRS4Q9BTZ2 278 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 NT5C1AQ9BXI3 368 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 DNAI2Q9GZS0 605 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 RNPEPQ9H4A4 650 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 DPP3Q9NY33 737 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 TJP2Q9UDY2 1190 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 PCSK1NQ9UHG2 260 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 XPO7Q9UIA9 1087 aaKnown RBP10.91□□□□□ -0.66
CD44-210ENST00000434472 USH1CQ9Y6N9 552 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 ZSWIM8A7E2V4 1837 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 ANK1P16157 1881 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 C2CD4BA6NLJ0 364 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 FOXO6A8MYZ6 492 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 TYROBPO43914 113 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 PRPSAP2O60256 369 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 DCTN3O75935 186 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 DDNO94850 711 aaPredicted RBP10.9□□□□□ -0.66
CD44-210ENST00000434472 RBP3P10745 1247 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 NQO1P15559 274 aaKnown RBP10.9□□□□□ -0.66
CD44-210ENST00000434472 TGM2P21980 687 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 FOXN2P32314 431 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 GRM5P41594 1212 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 NDST1P52848 882 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 MOGSQ13724 837 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 TTLL12Q14166 644 aaPredicted RBP10.9□□□□□ -0.66
CD44-210ENST00000434472 SEPT7Q16181 437 aaKnown RBP10.9□□□□□ -0.66
CD44-210ENST00000434472 DARS2Q6PI48 645 aaKnown RBP10.9□□□□□ -0.66
CD44-210ENST00000434472 ZNF410Q86VK4 478 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 ANKMY2Q8IV38 441 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 UNC45BQ8IWX7 931 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 KIAA0319LQ8IZA0 1049 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 FBXO36Q8NEA4 188 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 PPTC7Q8NI37 304 aa10.9□□□□□ -0.66
CD44-210ENST00000434472 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.9□□□□□ -0.66
CD44-210ENST00000434472 RXFP2Q8WXD0 754 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms