RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 ARL4CP56559 192 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 BACE1P56817 501 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 NLRP11P59045 1033 aaKnown RBP9.13□□□□□ -0.95
GABPB1-205ENST00000429662 NOP14P78316 857 aaKnown RBP9.13□□□□□ -0.95
GABPB1-205ENST00000429662 PPARDQ03181 441 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 CBLBQ13191 982 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 NCOA4Q13772 614 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 ACAP1Q15027 740 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 TMED2Q15363 201 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 HADHQ16836 314 aaKnown RBP9.13□□□□□ -0.95
GABPB1-205ENST00000429662 SGSM1Q2NKQ1 1148 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 C9orf50Q5SZB4 431 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 UBAP2Q5T6F2 1119 aaKnown RBP9.13□□□□□ -0.95
GABPB1-205ENST00000429662 TLDC1Q6P9B6 456 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 DCUN1D2Q6PH85 259 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 BRSK2Q8IWQ3 736 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 THNSL1Q8IYQ7 743 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 MAB21L3Q8N8X9 362 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 DNERQ8NFT8 737 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 GDAP1Q8TB36 358 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 LRRC8CQ8TDW0 803 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 FNIP1Q8TF40 1166 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 ZNF606Q8WXB4 792 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 SLC7A3Q8WY07 619 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 SNX27Q96L92 541 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 C9orf72Q96LT7 481 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 SH2D3AQ9BRG2 576 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 HERPUD2Q9BSE4 406 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 MSTO1Q9BUK6 570 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 TRABDQ9H4I3 376 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 ACAD9Q9H845 621 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 ZNF302Q9NR11 478 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 PSMC3IPQ9P2W1 217 aaPredicted RBP9.13□□□□□ -0.95
GABPB1-205ENST00000429662 GJD2Q9UKL4 321 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 ADAMTS5Q9UNA0 930 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 AGAP1Q9UPQ3 857 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 USTQ9Y2C2 406 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 ARIH1Q9Y4X5 557 aaPredicted RBP9.13□□□□□ -0.95
GABPB1-205ENST00000429662 TRIOO75962 3097 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 TCRBV5S1A1TA0A578 114 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 TM9SF1O15321 606 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 SPAG6O75602 509 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 ASS1P00966 412 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 LMNAP02545 664 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 CREB1P16220 341 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 KRT15P19012 456 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 CD58P19256 250 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 GLRA2P23416 452 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 VPS41P49754 854 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 ALDH5A1P51649 535 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 GEMIN4P57678 1058 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 KCNC4Q03721 635 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 GPS1Q13098 491 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 MPP2Q14168 576 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 OASLQ15646 514 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 SEPT7Q16181 437 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 MTERF2Q49AM1 385 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 EFHC2Q5JST6 749 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 ZFYVE27Q5T4F4 411 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 RNASEH2BQ5TBB1 312 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 HHATQ5VTY9 493 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 FYB2Q5VWT5 728 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 FAM160B1Q5W0V3 765 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 VSIG1Q86XK7 387 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 CCDC60Q8IWA6 550 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 PPIL6Q8IXY8 311 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 CYP4X1Q8N118 509 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 FITM2Q8N6M3 262 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 GPATCH11Q8N954 259 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 ATP11CQ8NB49 1132 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 REPS2Q8NFH8 660 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 N4BP2L2Q92802 583 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 APBB2Q92870 758 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 LRRC37BQ96QE4 947 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 TEX13BQ9BXU2 312 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 FRMD8Q9BZ67 464 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 NIF3L1Q9GZT8 377 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 LHX5Q9H2C1 402 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 LRMDAQ9H2I8 198 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 APOBEC3GQ9HC16 384 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 SAR1AQ9NR31 198 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 CTNNAL1Q9UBT7 734 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 DNPEPQ9ULA0 475 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 PHTF1Q9UMS5 762 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 C15orf41Q9Y2V0 281 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 CNTNAP2Q9UHC6 1331 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 DCHS1Q96JQ0 3298 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 C5orf42Q9H799 3197 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 IGKV6D-21A0A0A0MT36 114 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 FAM170AA1A519 330 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 LRRIQ4A6NIV6 560 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 TRAFD1O14545 582 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 LIN7AO14910 233 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 EDF1O60869 148 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 LUC7L3O95232 432 aaKnown RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 ANP32DO95626 131 aa9.12□□□□□ -0.95
GABPB1-205ENST00000429662 TROVE2P10155 538 aaKnown RBP eCLIP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 PECAM1P16284 738 aaPredicted RBP9.12□□□□□ -0.95
GABPB1-205ENST00000429662 ATF7P17544 494 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms