RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 DDX42Q86XP3 938 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMC1A-203ENST00000428014 ARID3BQ8IVW6 561 aaPredicted RBP9.71□□□□□ -0.86
SMC1A-203ENST00000428014 SMYD4Q8IYR2 804 aaPredicted RBP9.71□□□□□ -0.86
SMC1A-203ENST00000428014 SCML4Q8N228 414 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 TMEM130Q8N3G9 435 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 SYNPOQ8N3V7 929 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 TTC9BQ8N6N2 239 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 CLDN23Q96B33 292 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 TCEAL4Q96EI5 215 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 SLITRK1Q96PX8 696 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 MRPL45Q9BRJ2 306 aaKnown RBP9.71□□□□□ -0.86
SMC1A-203ENST00000428014 ATXN3LQ9H3M9 355 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 SEMA4AQ9H3S1 761 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 THG1LQ9NWX6 298 aaKnown RBP9.71□□□□□ -0.86
SMC1A-203ENST00000428014 NXF1Q9UBU9 619 aaKnown RBP9.71□□□□□ -0.86
SMC1A-203ENST00000428014 ARHGAP26Q9UNA1 814 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 LHX6Q9UPM6 363 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 DAAM1Q9Y4D1 1078 aa9.71□□□□□ -0.86
SMC1A-203ENST00000428014 KMT2EQ8IZD2 1858 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 KANSL1LA0AUZ9 987 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 TNFRSF10BO14763 440 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 MBD3O95983 291 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 PAEPP09466 180 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 USP17L7P0C7H9 530 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 MYL4P12829 197 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 NPR3P17342 541 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 AVPR1AP37288 418 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 FMO5P49326 533 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 GPC5P78333 572 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 SLC7A9P82251 487 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 SLC44A4Q53GD3 710 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 CWF19L1Q69YN2 538 aaKnown RBP9.7□□□□□ -0.86
SMC1A-203ENST00000428014 SCARA3Q6AZY7 606 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 TANGO2Q6ICL3 276 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 VITQ6UXI7 678 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 ZNF852Q6ZMS4 543 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 FAM35AQ86V20 835 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 RALGPS2Q86X27 583 aaPredicted RBP9.7□□□□□ -0.86
SMC1A-203ENST00000428014 FAM114A1Q8IWE2 563 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 FUKQ8N0W3 1084 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 NUP93Q8N1F7 819 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 CCDC26Q8TAB7 109 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 FAM200AQ8TCP9 573 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 BPIFB1Q8TDL5 484 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 GPR152Q8TDT2 470 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 NELFBQ8WX92 580 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 OTUB2Q96DC9 234 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 MCRS1Q96EZ8 462 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 CDK5RAP1Q96SZ6 601 aaKnown RBP9.7□□□□□ -0.86
SMC1A-203ENST00000428014 FAM83CQ9BQN1 747 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 PI4K2AQ9BTU6 479 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 MFSD1Q9H3U5 465 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 SMYD3Q9H7B4 428 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 ZNF334Q9HCZ1 680 aaPredicted RBP9.7□□□□□ -0.86
SMC1A-203ENST00000428014 LMBRD1Q9NUN5 540 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 TDP1Q9NUW8 608 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 TRPM5Q9NZQ8 1165 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 FBXL21Q9UKT6 434 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 CNTN6Q9UQ52 1028 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 NME7Q9Y5B8 376 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 OBSL1O75147 1896 aa9.7□□□□□ -0.86
SMC1A-203ENST00000428014 ZNF638Q14966 1978 aaKnown RBP9.7□□□□□ -0.86
SMC1A-203ENST00000428014 KRBA1A5PL33 1030 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 HEPACAM2A8MVW5 462 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 PROB1E7EW31 1015 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 F8VP50 259 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 ZNF263O14978 683 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 TADA3O75528 432 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 PAPSS2O95340 614 aaPredicted RBP9.69□□□□□ -0.86
SMC1A-203ENST00000428014 OAS1P00973 400 aaKnown RBP9.69□□□□□ -0.86
SMC1A-203ENST00000428014 COL4A2P08572 1712 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 PDGFRBP09619 1106 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 TRIM49P0CI25 452 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 TRIM49CP0CI26 452 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 SP100P23497 879 aaPredicted RBP9.69□□□□□ -0.86
SMC1A-203ENST00000428014 BDNFP23560 247 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 ACAT1P24752 427 aaKnown RBP9.69□□□□□ -0.86
SMC1A-203ENST00000428014 GRIK1P39086 918 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 NDST1P52848 882 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 PDGFRLQ15198 375 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 ZNF528Q3MIS6 628 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 MDH1BQ5I0G3 518 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 GPR158Q5T848 1215 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 PAQR9Q6ZVX9 377 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 CCDC105Q8IYK2 499 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 UBR7Q8N806 425 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 STKLD1Q8NE28 680 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 PJA1Q8NG27 643 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 LMO3Q8TAP4 145 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 WHAMMQ8TF30 809 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 RSAD2Q8WXG1 361 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 LPIN3Q9BQK8 851 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 SLC46A2Q9BY10 475 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 B3GNT5Q9BYG0 378 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 FAM126AQ9BYI3 521 aaPredicted RBP9.69□□□□□ -0.86
SMC1A-203ENST00000428014 IRX2Q9BZI1 471 aaPredicted RBP9.69□□□□□ -0.86
SMC1A-203ENST00000428014 ANAPC1Q9H1A4 1944 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 NUP62CLQ9H1M0 184 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 THAP9Q9H5L6 903 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 SLITRK6Q9H5Y7 841 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms