RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PDE6CP51160 858 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 CACNA2D1P54289 1103 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 NOP14P78316 857 aaKnown RBP19.6■□□□□ 0.73
GPC1-205ENST00000427506 MTAPQ13126 283 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 LRRC32Q14392 662 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 ZNF268Q14587 947 aaPredicted RBP19.6■□□□□ 0.73
GPC1-205ENST00000427506 ZCWPW2Q504Y3 356 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 ZNF658Q5TYW1 1059 aaPredicted RBP19.6■□□□□ 0.73
GPC1-205ENST00000427506 ACOT1Q86TX2 421 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 ZNF687Q8N1G0 1237 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 CCDC150Q8NCX0 1101 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 ERCC4Q92889 916 aaPredicted RBP19.6■□□□□ 0.73
GPC1-205ENST00000427506 EEF2KMTQ96G04 330 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 SLC22A12Q96S37 553 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 TSG101Q99816 390 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 PCDHA5Q9Y5H7 936 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 CACNA1HO95180 2353 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 EPB41P11171 864 aaKnown RBP19.59■□□□□ 0.73
GPC1-205ENST00000427506 NDST1P52848 882 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 PPP3CAQ08209 521 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 RUNX3Q13761 415 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 TRIM68Q6AZZ1 485 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 TXNDC11Q6PKC3 985 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 FAM35AQ86V20 835 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 TIGD1Q96MW7 591 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 FAM83CQ9BQN1 747 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 TTLL2Q9BWV7 592 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 CHRDQ9H2X0 955 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 SEMA4AQ9H3S1 761 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 EBF3Q9H4W6 596 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 PIEZO1Q92508 2521 aa19.59■□□□□ 0.73
GPC1-205ENST00000427506 CHRNB1P11230 501 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 PPP3CCP48454 512 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 ENPEPQ07075 957 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 ORC1Q13415 861 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 PPP2R5DQ14738 602 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 MTF1Q14872 753 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 PON2Q15165 354 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 ZNF528Q3MIS6 628 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 UNC93AQ86WB7 457 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 NUP93Q8N1F7 819 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 TAS1R2Q8TE23 839 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 SLITRK1Q96PX8 696 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 IER2Q9BTL4 223 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 GTPBP4Q9BZE4 634 aaKnown RBP19.58■□□□□ 0.72
GPC1-205ENST00000427506 TMEM8AQ9HCN3 771 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 TMEM30AQ9NV96 361 aa19.58■□□□□ 0.72
GPC1-205ENST00000427506 STX10O60499 249 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 KINO60870 393 aaKnown RBP19.57■□□□□ 0.72
GPC1-205ENST00000427506 AP1G2O75843 785 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 RTN3O95197 1032 aaPredicted RBP19.57■□□□□ 0.72
GPC1-205ENST00000427506 YWHAQP27348 245 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 ASPAP45381 313 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 IFNAR2P48551 515 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 TAF10Q12962 218 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 PDGFRLQ15198 375 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 DGKKQ5KSL6 1271 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 KRT39Q6A163 491 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 TSSK4Q6SA08 328 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 RIN3Q8TB24 985 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 SH3RF2Q8TEC5 729 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 SMARCD1Q96GM5 515 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 KCNK16Q96T55 309 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 DMAP1Q9NPF5 467 aaPredicted RBP19.57■□□□□ 0.72
GPC1-205ENST00000427506 HPS4Q9NQG7 708 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 RBM12Q9NTZ6 932 aaKnown RBP19.57■□□□□ 0.72
GPC1-205ENST00000427506 DUS2Q9NX74 493 aaKnown RBP19.57■□□□□ 0.72
GPC1-205ENST00000427506 GCNT4Q9P109 453 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 HMGXB4Q9UGU5 601 aa19.57■□□□□ 0.72
GPC1-205ENST00000427506 OBSL1O75147 1896 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 ZNF840PA6NDX5 716 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 LMNAP02545 664 aaKnown RBP19.56■□□□□ 0.72
GPC1-205ENST00000427506 CCDC130P13994 396 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 ARSAP15289 507 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 PFKLP17858 780 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 GTF2H1P32780 548 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 AMPD2Q01433 879 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 STIM1Q13586 685 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 ZNF77Q15935 545 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 COBLL1Q53SF7 1204 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 TCERG1LQ5VWI1 586 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 ISM2Q6H9L7 571 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 PAQR9Q6ZVX9 377 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 CRYBG2Q8N1P7 616 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 ATRIPQ8WXE1 791 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 FBXO32Q969P5 355 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 DNAI2Q9GZS0 605 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 NIF3L1Q9GZT8 377 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 KRT82Q9NSB4 513 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 FAM49BQ9NUQ9 324 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 ARHGAP26Q9UNA1 814 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 DENND4CQ5VZ89 1909 aa19.56■□□□□ 0.72
GPC1-205ENST00000427506 CD58P19256 250 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 MXI1P50539 228 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 CCR3P51677 355 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 FKBP3Q00688 224 aaKnown RBP19.55■□□□□ 0.72
GPC1-205ENST00000427506 USP4Q13107 963 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 DCAF17Q5H9S7 520 aaPredicted RBP19.55■□□□□ 0.72
GPC1-205ENST00000427506 ANKRD40Q6AI12 368 aa19.55■□□□□ 0.72
GPC1-205ENST00000427506 FUKQ8N0W3 1084 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms