RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 GALCP54803 685 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 TRIM48Q8IWZ4 208 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 ASZ1Q8WWH4 475 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 OMA1Q96E52 524 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 RHBDL2Q9NX52 303 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 AHSPQ9NZD4 102 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 MAPRE3Q9UPY8 281 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 GEMP55040 296 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 STX4Q12846 297 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 DGUOKQ16854 277 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 WDR24Q96S15 920 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 KIFC1Q9BW19 673 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 VCPKMTQ9H867 229 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 ANXA6P08133 673 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 HOXB6P17509 224 aaKnown RBP14.94□□□□□ -0.02
PTPN13-203ENST00000427191 RPS7P62081 194 aaKnown RBP14.94□□□□□ -0.02
PTPN13-203ENST00000427191 FAM98BQ52LJ0 330 aaKnown RBP14.94□□□□□ -0.02
PTPN13-203ENST00000427191 C4orf33Q8N1A6 199 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 C10orf53Q8N6V4 93 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 RDM1Q8NG50 284 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 SH3RF3Q8TEJ3 882 aaPredicted RBP14.94□□□□□ -0.02
PTPN13-203ENST00000427191 HDHD2Q9H0R4 259 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 MYL12AP19105 171 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 TRIM25Q14258 630 aaKnown RBP14.94□□□□□ -0.02
PTPN13-203ENST00000427191 NT5DC4Q86YG4 428 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 EID3Q8N140 333 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 TMEM237Q96Q45 408 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 FAM58BPP0C7Q3 252 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 CYP19A1P11511 503 aaPredicted RBP14.94□□□□□ -0.02
PTPN13-203ENST00000427191 IRAK1P51617 712 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 CDC42BPAQ5VT25 1732 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 MAGEB16A2A368 324 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 EXTL3O43909 919 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 TADA2AO75478 443 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 CLTBP09497 229 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 GTF2H1P32780 548 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 ERAP2Q6P179 960 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 C1orf50Q9BV19 199 aa14.94□□□□□ -0.02
PTPN13-203ENST00000427191 ITGA8P53708 1063 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 NDUFAF6Q330K2 333 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 SPHKAPQ2M3C7 1700 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 PALLDQ8WX93 1383 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 SDR42E2A6NKP2 422 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 PEX1O43933 1283 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 MYL4P12829 197 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 RPS6KA5O75582 802 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 HPGDP15428 266 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 CAMK2GQ13555 558 aaPredicted RBP14.93□□□□□ -0.02
PTPN13-203ENST00000427191 NR1I3Q14994 352 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 MB21D2Q8IYB1 491 aaPredicted RBP14.93□□□□□ -0.02
PTPN13-203ENST00000427191 ATP6V0D2Q8N8Y2 350 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 KIAA1257Q9ULG3 409 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 ZNF335Q9H4Z2 1342 aaPredicted RBP14.93□□□□□ -0.02
PTPN13-203ENST00000427191 NAA20P61599 178 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 ERO1BQ86YB8 467 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 MRPL39Q9NYK5 338 aaKnown RBP14.93□□□□□ -0.02
PTPN13-203ENST00000427191 RPS6P62753 249 aaKnown RBP14.93□□□□□ -0.02
PTPN13-203ENST00000427191 CD302Q8IX05 232 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 PDCD10Q9BUL8 212 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 APOL5Q9BWW9 433 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 USP17L15C9J2P7 530 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 USP17L13C9JLJ4 530 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 USP17L11C9JVI0 530 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 USP17L18D6R9N7 530 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 USP17L22D6RA61 530 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 USP17L17D6RBQ6 530 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 USP17L19D6RCP7 530 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 USP17L20D6RJB6 530 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 ANKRD65E5RJM6 399 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 TCN1P20061 433 aaPredicted RBP14.93□□□□□ -0.02
PTPN13-203ENST00000427191 MAPKAPK2P49137 400 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 USP17L24Q0WX57 530 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 CCDC153Q494R4 210 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 USP17L6PQ6QN14 398 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 PRMT7Q9NVM4 692 aaPredicted RBP14.93□□□□□ -0.02
PTPN13-203ENST00000427191 SLC39A10Q9ULF5 831 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 F5H423 210 aaPredicted RBP14.93□□□□□ -0.02
PTPN13-203ENST00000427191 ATP6AP1LQ52LC2 224 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 ZRANB3Q5FWF4 1079 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 TFDP3Q5H9I0 405 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 KCNT1Q5JUK3 1230 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 RIN2Q8WYP3 895 aaPredicted RBP14.93□□□□□ -0.02
PTPN13-203ENST00000427191 REPS1Q96D71 796 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 RXFP1Q9HBX9 757 aa14.93□□□□□ -0.02
PTPN13-203ENST00000427191 A0A087WWV3 80 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 C15orf38-AP3S2A0A0A6YYH1 394 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 CNPP09543 421 aaKnown RBP14.92□□□□□ -0.02
PTPN13-203ENST00000427191 ZNF618Q5T7W0 954 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 KLHL24Q6TFL4 600 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 ARPINQ7Z6K5 226 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 HS6ST3Q8IZP7 471 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 RBBP8NLQ8NC74 664 aaPredicted RBP14.92□□□□□ -0.02
PTPN13-203ENST00000427191 CENPTQ96BT3 561 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 MCRS1Q96EZ8 462 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 AGAP3Q96P47 875 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 NIF3L1Q9GZT8 377 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 SLC24A2Q9UI40 661 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 UQCRBP14927 111 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 PTPN7P35236 360 aa14.92□□□□□ -0.02
PTPN13-203ENST00000427191 KIAA0408Q6ZU52 694 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms