RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 SMG9Q9H0W8 520 aaKnown RBP23.7■■□□□ 1.38
PTCHD3P2-201ENST00000424937 TRPC7Q9HCX4 862 aa23.7■■□□□ 1.38
PTCHD3P2-201ENST00000424937 ZMYM5Q9UJ78 669 aa23.7■■□□□ 1.38
PTCHD3P2-201ENST00000424937 HCN4Q9Y3Q4 1203 aa23.7■■□□□ 1.38
PTCHD3P2-201ENST00000424937 PMM2O15305 246 aa23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 AFPP02771 609 aaKnown RBP23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 PSMC3P17980 439 aa23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 RFX1P22670 979 aa23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 VCPP55072 806 aaKnown RBP23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 PFKPQ01813 784 aa23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 CETN1Q12798 172 aa23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 CMTM8Q8IZV2 173 aa23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 TTC39CQ8N584 583 aa23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 KCNK16Q96T55 309 aa23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 BRD9Q9H8M2 597 aa23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 EHD2Q9NZN4 543 aa23.69■■□□□ 1.38
PTCHD3P2-201ENST00000424937 P4HA2O15460 535 aa23.68■■□□□ 1.38
PTCHD3P2-201ENST00000424937 MBD3O95983 291 aa23.68■■□□□ 1.38
PTCHD3P2-201ENST00000424937 FAM200BP0CF97 657 aa23.68■■□□□ 1.38
PTCHD3P2-201ENST00000424937 GDI1P31150 447 aa23.68■■□□□ 1.38
PTCHD3P2-201ENST00000424937 AVPR1AP37288 418 aa23.68■■□□□ 1.38
PTCHD3P2-201ENST00000424937 IER5LQ5T953 404 aa23.68■■□□□ 1.38
PTCHD3P2-201ENST00000424937 CWF19L1Q69YN2 538 aaKnown RBP23.68■■□□□ 1.38
PTCHD3P2-201ENST00000424937 MFSD6LQ8IWD5 586 aa23.68■■□□□ 1.38
PTCHD3P2-201ENST00000424937 YAF2Q8IY57 180 aa23.68■■□□□ 1.38
PTCHD3P2-201ENST00000424937 NT5C1BQ96P26 610 aa23.68■■□□□ 1.38
PTCHD3P2-201ENST00000424937 TTLL2Q9BWV7 592 aa23.68■■□□□ 1.38
PTCHD3P2-201ENST00000424937 STK25O00506 426 aa23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 TBXAS1P24557 533 aaPredicted RBP23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 WEE1P30291 646 aa23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 YWHAEP62258 255 aaKnown RBP23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 MLF2Q15773 248 aaPredicted RBP23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 MON1AQ86VX9 555 aa23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 NUP93Q8N1F7 819 aa23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 CYFIP2Q96F07 1278 aa23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 HNRNPABQ99729 332 aaKnown RBP23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 SMOQ99835 787 aa23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 FAM124BQ9H5Z6 455 aaPredicted RBP23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 TBC1D17Q9HA65 648 aa23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 TRPM5Q9NZQ8 1165 aa23.67■■□□□ 1.38
PTCHD3P2-201ENST00000424937 ZNF263O14978 683 aa23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 RTN3O95197 1032 aaPredicted RBP23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 NPR3P17342 541 aa23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 ERCC5P28715 1186 aaPredicted RBP23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 SLC5A3P53794 718 aa23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 MAP3K7CLP57077 242 aa23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 ZMIZ2Q8NF64 920 aa23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 DNASE1L2Q92874 299 aa23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 JAKMIP2Q96AA8 810 aa23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 TMEM176AQ96HP8 235 aa23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 HEXIM2Q96MH2 286 aaKnown RBP23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 OBP2AQ9NY56 170 aa23.66■■□□□ 1.38
PTCHD3P2-201ENST00000424937 C2orf78A6NCI8 922 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 SOBPA7XYQ1 873 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 BEST1O76090 585 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 CKMP06732 381 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 YWHAQP27348 245 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 MTIF2P46199 727 aaKnown RBP23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 RAD23BP54727 409 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 TAF10Q12962 218 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 SLC44A4Q53GD3 710 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 PPP1R26Q5T8A7 1209 aaPredicted RBP23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 ASTLQ6HA08 431 aaPredicted RBP23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 RBM43Q6ZSC3 357 aaKnown RBP23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 IRF2BP1Q8IU81 584 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 PPM1KQ8N3J5 372 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 CELF5Q8N6W0 485 aaKnown RBP23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 SLC4A11Q8NBS3 891 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 LMO3Q8TAP4 145 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 IRF7Q92985 503 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 FBXO32Q969P5 355 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 SLITRK1Q96PX8 696 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 CSNK1G1Q9HCP0 422 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 CCL26Q9Y258 94 aa23.65■■□□□ 1.38
PTCHD3P2-201ENST00000424937 TRAV19A0A0A6YYK7 116 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 AVPR2P30518 371 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 FCHO2Q0JRZ9 810 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 CLEC20AQ6ZU45 233 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 FAM114A1Q8IWE2 563 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 SCAMP5Q8TAC9 235 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 BPIFB1Q8TDL5 484 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 USP13Q92995 863 aaPredicted RBP23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 SHDQ96IW2 340 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 LRRC3BQ96PB8 259 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 SLC22A12Q96S37 553 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 INTS2Q9H0H0 1204 aaKnown RBP23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 THAP9Q9H5L6 903 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 HEBP1Q9NRV9 189 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 TDP1Q9NUW8 608 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 GCNT4Q9P109 453 aa23.64■■□□□ 1.37
PTCHD3P2-201ENST00000424937 TNFRSF10BO14763 440 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 CHADO15335 359 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ABL1P00519 1130 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 USP17L7P0C7H9 530 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PPP3CCP48454 512 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 PRKCQQ04759 706 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 HSP90AA4PQ58FG1 418 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 CCDC183Q5T5S1 534 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 TPRG1Q6ZUI0 275 aa23.63■■□□□ 1.37
PTCHD3P2-201ENST00000424937 ARHGEF19Q8IW93 802 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms