RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 TDP1Q9NUW8 608 aa16.47■□□□□ 0.23
SPC24-201ENST00000423327 RMND1Q9NWS8 449 aa16.47■□□□□ 0.23
SPC24-201ENST00000423327 ZMYM5Q9UJ78 669 aa16.47■□□□□ 0.23
SPC24-201ENST00000423327 RIF1Q5UIP0 2472 aaKnown RBP16.47■□□□□ 0.23
SPC24-201ENST00000423327 SOBPA7XYQ1 873 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 SPECC1L-ADORA2AF8WAN1 911 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 MAN2B1O00754 1011 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 SP9P0CG40 484 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 CD44P16070 742 aaKnown RBP16.46■□□□□ 0.23
SPC24-201ENST00000423327 RPL13P26373 211 aaKnown RBP16.46■□□□□ 0.23
SPC24-201ENST00000423327 CTHP32929 405 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 NDST1P52848 882 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 MLLT6P55198 1093 aaPredicted RBP16.46■□□□□ 0.23
SPC24-201ENST00000423327 GAS6Q14393 721 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 ZNF268Q14587 947 aaPredicted RBP16.46■□□□□ 0.23
SPC24-201ENST00000423327 ZNF77Q15935 545 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 ANKRD40Q6AI12 368 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 ACOT1Q86TX2 421 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 FUKQ8N0W3 1084 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 ARL14EPQ8N8R7 260 aaPredicted RBP16.46■□□□□ 0.23
SPC24-201ENST00000423327 ZMIZ2Q8NF64 920 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 SMARCE1Q969G3 411 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 CCDC34Q96HJ3 373 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 CEP295NLQ96MC4 621 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 KCNK16Q96T55 309 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 KIF9Q9HAQ2 790 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 TMEM8AQ9HCN3 771 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 TRPC7Q9HCX4 862 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 MAN1B1Q9UKM7 699 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 CIZ1Q9ULV3 898 aaPredicted RBP16.46■□□□□ 0.23
SPC24-201ENST00000423327 FAM186AA6NE01 2351 aa16.46■□□□□ 0.23
SPC24-201ENST00000423327 PRR23AA6NEV1 266 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 BEST1O76090 585 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 CLSTN1O94985 981 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 CHRNB1P11230 501 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 KRT13P13646 458 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 CCDC130P13994 396 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 ARSAP15289 507 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 ANXA13P27216 316 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 MAGEA9P43362 315 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 INCA1Q0VD86 236 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 ISM2Q6H9L7 571 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 ELOA2Q8IYF1 753 aaPredicted RBP16.45■□□□□ 0.22
SPC24-201ENST00000423327 CSGALNACT1Q8TDX6 532 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 WHAMMQ8TF30 809 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 NELL2Q99435 816 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 SMOQ99835 787 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 CHRDQ9H2X0 955 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 PRMT8Q9NR22 394 aaPredicted RBP16.45■□□□□ 0.22
SPC24-201ENST00000423327 GKN1Q9NS71 199 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 RBM12Q9NTZ6 932 aaKnown RBP16.45■□□□□ 0.22
SPC24-201ENST00000423327 SPATA6Q9NWH7 488 aaPredicted RBP16.45■□□□□ 0.22
SPC24-201ENST00000423327 MRPS17Q9Y2R5 130 aaKnown RBP16.45■□□□□ 0.22
SPC24-201ENST00000423327 R4GN57 208 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 MYH10P35580 1976 aa16.45■□□□□ 0.22
SPC24-201ENST00000423327 GPR179Q6PRD1 2367 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 MYO16Q9Y6X6 1858 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 ZNF840PA6NDX5 716 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 TNFRSF10BO14763 440 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 GFRA3O60609 400 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 SMC2O95347 1197 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 OLFM2O95897 454 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 KPNA1P52294 538 aaPredicted RBP16.44■□□□□ 0.22
SPC24-201ENST00000423327 PLCB2Q00722 1185 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 MTAPQ13126 283 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 CBWD6Q4V339 395 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 CBWD3Q5JTY5 395 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 CBWD5Q5RIA9 395 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 NAIF1Q69YI7 327 aaPredicted RBP16.44■□□□□ 0.22
SPC24-201ENST00000423327 CRYBG2Q8N1P7 616 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 C12orf29Q8N999 325 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 TNIP3Q96KP6 325 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 NIF3L1Q9GZT8 377 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 EBF3Q9H4W6 596 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 C8orf33Q9H7E9 229 aaPredicted RBP16.44■□□□□ 0.22
SPC24-201ENST00000423327 KRT82Q9NSB4 513 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 FAM49BQ9NUQ9 324 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 GVINP1Q7Z2Y8 2422 aa16.44■□□□□ 0.22
SPC24-201ENST00000423327 TRAV19A0A0A6YYK7 116 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 CETN3O15182 167 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 SLC16A3O15427 465 aaKnown RBP16.43■□□□□ 0.22
SPC24-201ENST00000423327 OAS1P00973 400 aaKnown RBP16.43■□□□□ 0.22
SPC24-201ENST00000423327 CKMP06732 381 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 USP17L7P0C7H9 530 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 EPB41P11171 864 aaKnown RBP16.43■□□□□ 0.22
SPC24-201ENST00000423327 TDGF1P13385 188 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 P4HA1P13674 534 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 TCF3P15923 654 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 GTF2H1P32780 548 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 MXI1P50539 228 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 SLC5A3P53794 718 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 TAF10Q12962 218 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 MTF1Q14872 753 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 PON2Q15165 354 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 KRT39Q6A163 491 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 Q6ZS52 159 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 UNC93AQ86WB7 457 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 RALGPS2Q86X27 583 aaPredicted RBP16.43■□□□□ 0.22
SPC24-201ENST00000423327 SCAMP5Q8TAC9 235 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 SLC2A14Q8TDB8 520 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms