RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 LEFTY2O00292 366 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 PROS1P07225 676 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 PDGFRBP09619 1106 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 HDCP19113 662 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 PNPLA4P41247 253 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 MYL7Q01449 175 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 CEBPZQ03701 1054 aaKnown RBP13.79□□□□□ -0.2
LINC00339-203ENST00000420503 KCNB1Q14721 858 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 FBXO43Q4G163 708 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 LARP1BQ659C4 914 aaKnown RBP13.79□□□□□ -0.2
LINC00339-203ENST00000420503 FAM171BQ6P995 826 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 RASSF3Q86WH2 238 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 CBWD2Q8IUF1 395 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 ALLCQ8N6M5 410 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 ATP2A3Q93084 1043 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 ELMO3Q96BJ8 720 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 ACCSQ96QU6 501 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 GDAP2Q9NXN4 497 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 ZMYM5Q9UJ78 669 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 ZMIZ1Q9ULJ6 1067 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 ARHGAP26Q9UNA1 814 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 SMC3Q9UQE7 1217 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 KIF3AQ9Y496 699 aa13.79□□□□□ -0.2
LINC00339-203ENST00000420503 SGK1O00141 431 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 RHOBTB1O94844 696 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 IDEP14735 1019 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 SCP2P22307 547 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 PTGER3P43115 390 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 DHPSP49366 369 aaPredicted RBP13.78□□□□□ -0.2
LINC00339-203ENST00000420503 KDSRQ06136 332 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 UAP1L1Q3KQV9 507 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 CFAP221Q4G0U5 840 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 UNQ6494/PRO21346Q6UXR6 183 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 LIMS2Q7Z4I7 341 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 TOP6BLQ8N6T0 577 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 LRRC52Q8N7C0 313 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 DEFB124Q8NES8 71 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 PIGKQ92643 395 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 WBP2Q969T9 261 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 ACDQ96AP0 544 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 HVCN1Q96D96 273 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 FNBP1Q96RU3 617 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 MRPL45Q9BRJ2 306 aaKnown RBP13.78□□□□□ -0.2
LINC00339-203ENST00000420503 DPEP3Q9H4B8 488 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 TMEM74BQ9NUR3 256 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 UXTQ9UBK9 157 aaPredicted RBP13.78□□□□□ -0.2
LINC00339-203ENST00000420503 MBD1Q9UIS9 605 aaPredicted RBP13.78□□□□□ -0.2
LINC00339-203ENST00000420503 ITGA11Q9UKX5 1188 aa13.78□□□□□ -0.2
LINC00339-203ENST00000420503 CIZ1Q9ULV3 898 aaPredicted RBP13.78□□□□□ -0.2
LINC00339-203ENST00000420503 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 VPS37CA5D8V6 355 aaPredicted RBP13.77□□□□□ -0.21
LINC00339-203ENST00000420503 KLF8O95600 359 aaPredicted RBP13.77□□□□□ -0.21
LINC00339-203ENST00000420503 HOXD13P35453 343 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 TIE1P35590 1138 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 RBP5P82980 135 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 AMPD2Q01433 879 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 CYP27A1Q02318 531 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 IFRD2Q12894 506 aaPredicted RBP13.77□□□□□ -0.21
LINC00339-203ENST00000420503 POSTNQ15063 836 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 CRY1Q16526 586 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 MDH1BQ5I0G3 518 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 CYP2U1Q7Z449 544 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 NT5DC4Q86YG4 428 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 TMEFF1Q8IYR6 380 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 TMEM86AQ8N2M4 240 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 DEFB119Q8N690 84 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 TXNDC5Q8NBS9 432 aaKnown RBP13.77□□□□□ -0.21
LINC00339-203ENST00000420503 PCED1BQ96HM7 432 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 HPDLQ96IR7 371 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 CNOT6LQ96LI5 555 aaKnown RBP13.77□□□□□ -0.21
LINC00339-203ENST00000420503 MMP17Q9ULZ9 603 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 CPQQ9Y646 472 aa13.77□□□□□ -0.21
LINC00339-203ENST00000420503 FRMD3A2A2Y4 597 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 ZNF840PA6NDX5 716 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 SOBPA7XYQ1 873 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 F8VP50 259 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 CLDN5O00501 218 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 TRIM24O15164 1050 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 ADAM23O75077 832 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 ABL1P00519 1130 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 TMEM191BP0C7N4 346 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 GRIK1P39086 918 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 MAGEA11P43364 429 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 MAPK8P45983 427 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 POU5F1Q01860 360 aaKnown RBP13.76□□□□□ -0.21
LINC00339-203ENST00000420503 DHCR24Q15392 516 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 USP39Q53GS9 565 aaKnown RBP13.76□□□□□ -0.21
LINC00339-203ENST00000420503 RRAGBQ5VZM2 374 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 SYCP3Q8IZU3 236 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 IL17RCQ8NAC3 791 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 OR2I1PQ8NGU4 316 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 OLIG1Q8TAK6 271 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 TRIM9Q9C026 710 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 ZNF518BQ9C0D4 1074 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 INTS13Q9NVM9 706 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 CFAP97Q9P2B7 532 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 STK17AQ9UEE5 414 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 HCN2Q9UL51 889 aa13.76□□□□□ -0.21
LINC00339-203ENST00000420503 GTF3C3Q9Y5Q9 886 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms