RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 PFKLP17858 780 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 GNL1P36915 607 aaPredicted RBP15.4■□□□□ 0.06
PAF1-202ENST00000416728 USP46P62068 366 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 SNRPFP62306 86 aaKnown RBP15.4■□□□□ 0.06
PAF1-202ENST00000416728 TNNC1P63316 161 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 CYP24A1Q07973 514 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 PSMD2Q13200 908 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 WDR72Q3MJ13 1102 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 UNC13DQ70J99 1090 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 SYT13Q7L8C5 426 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 KBTBD6Q86V97 674 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 C12orf50Q8NA57 414 aaPredicted RBP15.4■□□□□ 0.06
PAF1-202ENST00000416728 OR6B3Q8NGW1 331 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 SCFD1Q8WVM8 642 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 ACDQ96AP0 544 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 MRPL45Q9BRJ2 306 aaKnown RBP15.4■□□□□ 0.06
PAF1-202ENST00000416728 ARRDC1-AS1Q9H2J1 176 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 F8VP50 259 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 EPN2O95208 641 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 RAP1GAPP47736 663 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 PPP3CCP48454 512 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 TRPC3Q13507 836 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 DMC1Q14565 340 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 AASDHQ4L235 1098 aaPredicted RBP15.39■□□□□ 0.05
PAF1-202ENST00000416728 PPM1JQ5JR12 505 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 FOXD4L5Q5VV16 416 aaPredicted RBP15.39■□□□□ 0.05
PAF1-202ENST00000416728 CCDC26Q8TAB7 109 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 FOXD4L4Q8WXT5 416 aaPredicted RBP15.39■□□□□ 0.05
PAF1-202ENST00000416728 EZH1Q92800 747 aaPredicted RBP15.39■□□□□ 0.05
PAF1-202ENST00000416728 C8orf48Q96LL4 319 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 TTLL2Q9BWV7 592 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 BACH2Q9BYV9 841 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 LINC00597Q9H2U6 94 aa15.39■□□□□ 0.05
PAF1-202ENST00000416728 ZNF840PA6NDX5 716 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 LEFTY2O00292 366 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 POLR2DO15514 142 aaKnown RBP15.38■□□□□ 0.05
PAF1-202ENST00000416728 APBB3O95704 486 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 ABL1P00519 1130 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 FAM163BP0C2L3 166 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 PTPN1P18031 435 aaKnown RBP15.38■□□□□ 0.05
PAF1-202ENST00000416728 NOP14P78316 857 aaKnown RBP15.38■□□□□ 0.05
PAF1-202ENST00000416728 EHHADHQ08426 723 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 SF3A2Q15428 464 aaKnown RBP15.38■□□□□ 0.05
PAF1-202ENST00000416728 CCDC6Q16204 474 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 IL31Q6EBC2 164 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 DDX1Q92499 740 aaKnown RBP15.38■□□□□ 0.05
PAF1-202ENST00000416728 CNTNAP3BQ96NU0 1288 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 CNTNAP3Q9BZ76 1288 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 ELOVL4Q9GZR5 314 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 BLZF1Q9H2G9 400 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 FAM13BQ9NYF5 915 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 CGNQ9P2M7 1197 aaKnown RBP15.38■□□□□ 0.05
PAF1-202ENST00000416728 NME7Q9Y5B8 376 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 PCDHGA5Q9Y5G8 931 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 SPTBN2O15020 2390 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 OBSL1O75147 1896 aa15.38■□□□□ 0.05
PAF1-202ENST00000416728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.37■□□□□ 0.05
PAF1-202ENST00000416728 A8MXQ7 604 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 PHACTR2O75167 634 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 ADRB1P08588 477 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 ZNF806P0C7X5 589 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 CASP1P29466 404 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 ATICP31939 592 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 MYL6P60660 151 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 SLC7A9P82251 487 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 ZXDBP98169 803 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 ELF2Q15723 593 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 FOXD4L6Q3SYB3 417 aaPredicted RBP15.37■□□□□ 0.05
PAF1-202ENST00000416728 TDRD10Q5VZ19 366 aaKnown RBP15.37■□□□□ 0.05
PAF1-202ENST00000416728 FOXD4L3Q6VB84 417 aaPredicted RBP15.37■□□□□ 0.05
PAF1-202ENST00000416728 C12orf56Q8IXR9 622 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 B3GALNT2Q8NCR0 500 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 SYAP1Q96A49 352 aaPredicted RBP15.37■□□□□ 0.05
PAF1-202ENST00000416728 ZC3H10Q96K80 434 aaKnown RBP15.37■□□□□ 0.05
PAF1-202ENST00000416728 SLITRK1Q96PX8 696 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 DPEP3Q9H4B8 488 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 SLC39A2Q9NP94 309 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 NXF1Q9UBU9 619 aaKnown RBP15.37■□□□□ 0.05
PAF1-202ENST00000416728 DENND4CQ5VZ89 1909 aa15.37■□□□□ 0.05
PAF1-202ENST00000416728 PVALEFA0A1B0GWK0 134 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 EXOC3O60645 756 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 CLSTN1O94985 981 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 STAU1O95793 577 aaKnown RBP15.36■□□□□ 0.05
PAF1-202ENST00000416728 OLFM2O95897 454 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 PDIA4P13667 645 aaKnown RBP15.36■□□□□ 0.05
PAF1-202ENST00000416728 KCNA4P22459 653 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 MPLP40238 635 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 ME1P48163 572 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 LIMK1P53667 647 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 IFRD2Q12894 506 aaPredicted RBP15.36■□□□□ 0.05
PAF1-202ENST00000416728 TAF10Q12962 218 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 KNOP1Q1ED39 458 aaKnown RBP15.36■□□□□ 0.05
PAF1-202ENST00000416728 BMT2Q1RMZ1 405 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 PLK5Q496M5 336 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 KIAA1958Q8N8K9 716 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 TSTD1Q8NFU3 115 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 ZNF516Q92618 1163 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 ZNF518BQ9C0D4 1074 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 RNF38Q9H0F5 515 aa15.36■□□□□ 0.05
PAF1-202ENST00000416728 GZF1Q9H116 711 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms