RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 SLC1A1P43005 524 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 SSR1P43307 286 aaKnown RBP13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 SLC39A12Q504Y0 691 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 CCDC181Q5TID7 509 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 ZNF280DQ6N043 979 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 KCNT2Q6UVM3 1135 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 C4orf50Q6ZRC1 276 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 PIGZQ86VD9 579 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 LRRTM3Q86VH5 581 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 TMEM173Q86WV6 379 aaPredicted RBP13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 CMTR2Q8IYT2 770 aaKnown RBP13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 CEP112Q8N8E3 955 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 JOSD2Q8TAC2 188 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 COG1Q8WTW3 980 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 SMARCD1Q96GM5 515 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 ZNF558Q96NG5 402 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 ZBED2Q9BTP6 218 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 LRRC4Q9HBW1 653 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 CYLDQ9NQC7 956 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 TMLHEQ9NVH6 421 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 LTBP2Q14767 1821 aa13.23□□□□□ -0.29
PRAMEF9-201ENST00000415919 OR4Q2P0C623 313 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 FGFR3P22607 806 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 BDNFP23560 247 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 PAFAH1B1P43034 410 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 SLC6A3Q01959 620 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 CKAP4Q07065 602 aaKnown RBP13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 PSRC1Q6PGN9 363 aaPredicted RBP13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 CPNE8Q86YQ8 564 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 ZDHHC17Q8IUH5 632 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 MYRIPQ8NFW9 859 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 BCL7CQ8WUZ0 217 aaPredicted RBP13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 PBKQ96KB5 322 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 PKMYT1Q99640 499 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 ZMYND8Q9ULU4 1186 aaPredicted RBP13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 TSC2P49815 1807 aa13.22□□□□□ -0.29
PRAMEF9-201ENST00000415919 OR6C75A6NL08 312 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 H7C4K7 107 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 PAPSS1O43252 624 aaPredicted RBP13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 LAG3P18627 525 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 PSMA2P25787 234 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 ARPP19P56211 112 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 PIGHQ14442 188 aaPredicted RBP13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 TMEM240Q5SV17 173 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 OLFML1Q6UWY5 402 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 TAS1R1Q7RTX1 841 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 EMC1Q8N766 993 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 DPF3Q92784 378 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 IGSF21Q96ID5 467 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 KCNK16Q96T55 309 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 SMOQ99835 787 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 LBHD1Q9BQE6 289 aaPredicted RBP13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 TTPALQ9BTX7 342 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 ZCWPW1Q9H0M4 648 aa13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 MRPL42Q9Y6G3 142 aaKnown RBP13.21□□□□□ -0.29
PRAMEF9-201ENST00000415919 CCDC66A2RUB6 948 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 DDX3YO15523 660 aaKnown RBP13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 CEP104O60308 925 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 GRAP2O75791 330 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 GABBR2O75899 941 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 RPL34P49207 117 aaKnown RBP13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 RABGGTBP53611 331 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 CACNA2D1P54289 1103 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 EPHB4P54760 987 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 OGDHQ02218 1023 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 ADIGQ0VDE8 80 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 MRPL58Q14197 206 aaKnown RBP13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 USP41Q3LFD5 358 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 RTP2Q5QGT7 225 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 KIAA1841Q6NSI8 718 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 ANKS3Q6ZW76 656 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 CREG2Q8IUH2 290 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 CLEC4CQ8WTT0 213 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 KCTD13Q8WZ19 329 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 TMEM169Q96HH4 297 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 MS4A14Q96JA4 679 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 YY1AP1Q9H869 796 aa13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 RC3H2Q9HBD1 1191 aaKnown RBP13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 ABI2Q9NYB9 513 aaPredicted RBP13.21□□□□□ -0.3
PRAMEF9-201ENST00000415919 MKI67P46013 3256 aaKnown RBP13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 CTAGE15A4D2H0 777 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 F8VP50 259 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 CTAGE8P0CG41 777 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 CPB1P15086 417 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 CTNNA2P26232 953 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 MAN1A1P33908 653 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 CTNNA1P35221 906 aaKnown RBP13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 TKTL1P51854 596 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 NFE2Q16621 373 aaPredicted RBP13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 CFAP221Q4G0U5 840 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 DAB2IPQ5VWQ8 1189 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 CC2D1AQ6P1N0 951 aaPredicted RBP13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 CTAGE6Q86UF2 777 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 CTAGE4Q8IX94 777 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 COLGALT1Q8NBJ5 622 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 KRT35Q92764 455 aa13.2□□□□□ -0.3
PRAMEF9-201ENST00000415919 CD101Q93033 1021 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms