RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 PGBD2Q6P3X8 592 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 PDZD4Q76G19 769 aaPredicted RBP6.93□□□□□ -1.3
EPHA4-204ENST00000415749 LIX1LQ8IVB5 337 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 LINC01356Q8N9X3 169 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 OR5AN1Q8NGI8 311 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 SMCR8Q8TEV9 937 aaPredicted RBP6.93□□□□□ -1.3
EPHA4-204ENST00000415749 ZCCHC14Q8WYQ9 949 aaKnown RBP6.93□□□□□ -1.3
EPHA4-204ENST00000415749 TEKT1Q969V4 418 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 FAM84BQ96KN1 310 aaPredicted RBP6.93□□□□□ -1.3
EPHA4-204ENST00000415749 PPM1MQ96MI6 270 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 TOX2Q96NM4 488 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 MRIQ9BWK5 157 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 C22orf23Q9BZE7 217 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 LRRC27Q9C0I9 530 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 PITHD1Q9GZP4 211 aaPredicted RBP6.93□□□□□ -1.3
EPHA4-204ENST00000415749 TMEM168Q9H0V1 697 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 ARMT1Q9H993 441 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 Q9UFV3 132 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 EVLQ9UI08 416 aaPredicted RBP6.93□□□□□ -1.3
EPHA4-204ENST00000415749 ZHX2Q9Y6X8 837 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 PFASO15067 1338 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 A0A1B0GVC2 190 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 POM121BA6NF01 834 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 OPHN1O60890 802 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 CSTBP04080 98 aaKnown RBP6.92□□□□□ -1.3
EPHA4-204ENST00000415749 CYP1A1P04798 512 aaPredicted RBP6.92□□□□□ -1.3
EPHA4-204ENST00000415749 PFKMP08237 780 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 FOSL2P15408 326 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 ADCY8P40145 1251 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 IL12RB1P42701 662 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 GPR15P49685 360 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 MAP2K6P52564 334 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 G3BP1Q13283 466 aaKnown RBP eCLIP6.92□□□□□ -1.3
EPHA4-204ENST00000415749 IL10RAQ13651 578 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 TRIM25Q14258 630 aaKnown RBP6.92□□□□□ -1.3
EPHA4-204ENST00000415749 GCKRQ14397 625 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 STARD3Q14849 445 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 LRRC26Q2I0M4 334 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 FAM26FQ5R3K3 315 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 TMEM200BQ69YZ2 307 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 APOBEC3HQ6NTF7 200 aaKnown RBP6.92□□□□□ -1.3
EPHA4-204ENST00000415749 CYP26C1Q6V0L0 522 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 GADL1Q6ZQY3 521 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 REXO1L1PQ8IX06 675 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 DRC7Q8IY82 874 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 SYTL1Q8IYJ3 562 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 CARFQ8N187 725 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 ANKRD13CQ8N6S4 541 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 CDYL2Q8N8U2 506 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 ZNF527Q8NB42 609 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 FAM151AQ8WW52 585 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 KAT5Q92993 513 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 TMEM41AQ96HV5 264 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 HIST1H2AHQ96KK5 128 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 HIST1H2AJQ99878 128 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 NOL10Q9BSC4 688 aaKnown RBP6.92□□□□□ -1.3
EPHA4-204ENST00000415749 SAE1Q9UBE0 346 aaPredicted RBP6.92□□□□□ -1.3
EPHA4-204ENST00000415749 GJD2Q9UKL4 321 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 TMPRSS11EQ9UL52 423 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 PADI4Q9UM07 663 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 SLC45A1Q9Y2W3 748 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 PCDHB6Q9Y5E3 794 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 SPEF2Q9C093 1822 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 MGAMO43451 1857 aa6.92□□□□□ -1.3
EPHA4-204ENST00000415749 A0A088AWK7 358 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 A0A0A6YYJ9 748 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 A0A0G2JLL6 359 aaPredicted RBP6.91□□□□□ -1.3
EPHA4-204ENST00000415749 C9orf118A6NHY6 69 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 FFAR3O14843 346 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 NCAM2O15394 837 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 NRP2O60462 931 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 KLHL18O94889 574 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 PCDH8O95206 1070 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 FTLP02792 175 aaPredicted RBP6.91□□□□□ -1.3
EPHA4-204ENST00000415749 C8AP07357 584 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 ZNF853P0CG23 659 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 XPAP23025 273 aaPredicted RBP6.91□□□□□ -1.3
EPHA4-204ENST00000415749 SHHQ15465 462 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 ZNF124Q15973 351 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 CCDC178Q5BJE1 867 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 HIBCHQ6NVY1 386 aaPredicted RBP6.91□□□□□ -1.3
EPHA4-204ENST00000415749 CFAP161Q6P656 301 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 UNQ6494/PRO21346Q6UXR6 183 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 PRRT2Q7Z6L0 340 aaPredicted RBP6.91□□□□□ -1.3
EPHA4-204ENST00000415749 CCDC33Q8N5R6 958 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 C8orf58Q8NAV2 365 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 UBXN10Q96LJ8 280 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 TTYH1Q9H313 450 aaPredicted RBP6.91□□□□□ -1.3
EPHA4-204ENST00000415749 ATP6V0A4Q9HBG4 840 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 BARX1Q9HBU1 254 aaPredicted RBP6.91□□□□□ -1.3
EPHA4-204ENST00000415749 KIAA1586Q9HCI6 787 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 CNNM1Q9NRU3 951 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 POLG2Q9UHN1 485 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 AFG3L2Q9Y4W6 797 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 VCANP13611 3396 aa6.91□□□□□ -1.3
EPHA4-204ENST00000415749 RRN3P2A6NIE6 340 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 FRAT2O75474 233 aaPredicted RBP6.9□□□□□ -1.3
EPHA4-204ENST00000415749 CYP2B6P20813 491 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 ETV4P43268 484 aa6.9□□□□□ -1.3
EPHA4-204ENST00000415749 SESN2P58004 480 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms