RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 FAM71BQ8TC56 605 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 MYLPFQ96A32 169 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 HNRNPABQ99729 332 aaKnown RBP16.39■□□□□ 0.21
SHMT2-202ENST00000414700 TTPALQ9BTX7 342 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 MTIF3Q9H2K0 278 aaKnown RBP16.39■□□□□ 0.21
SHMT2-202ENST00000414700 OSGEPQ9NPF4 335 aa16.39■□□□□ 0.21
SHMT2-202ENST00000414700 RPL17P18621 184 aaKnown RBP16.38■□□□□ 0.21
SHMT2-202ENST00000414700 MMP8P22894 467 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 RGS7P49802 495 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 ELAVL2Q12926 359 aaKnown RBP16.38■□□□□ 0.21
SHMT2-202ENST00000414700 PDCLQ13371 301 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 CTXN3Q4LDR2 81 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 CYP4A22Q5TCH4 519 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 ZNF662Q6ZS27 426 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 PHF13Q86YI8 300 aaPredicted RBP16.38■□□□□ 0.21
SHMT2-202ENST00000414700 ANKRD52Q8NB46 1076 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 LUC7LQ9NQ29 371 aaKnown RBP16.38■□□□□ 0.21
SHMT2-202ENST00000414700 CHST7Q9NS84 486 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 SPG21Q9NZD8 308 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 ADAM22Q9P0K1 906 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 MYO1AQ9UBC5 1043 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 CEP83Q9Y592 693 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 H0YGN5 161 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 KRT86O43790 486 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 GABBR2O75899 941 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 TMEM253P0C7T8 217 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 RRM1P23921 792 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 MYO9BQ13459 2157 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 TUBB2AQ13885 445 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 STILQ15468 1287 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 USP41Q3LFD5 358 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 SLC39A12Q504Y0 691 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 FAM35AQ86V20 835 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 SLC35F5Q8WV83 523 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 AUTS2Q8WXX7 1259 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 CTNNBL1Q8WYA6 563 aaPredicted RBP16.38■□□□□ 0.21
SHMT2-202ENST00000414700 ZNF653Q96CK0 615 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 MED10Q9BTT4 135 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 TUBB2BQ9BVA1 445 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 HESX1Q9UBX0 185 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 COG5Q9UP83 839 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 CAPN6Q9Y6Q1 641 aa16.38■□□□□ 0.21
SHMT2-202ENST00000414700 ADAM12O43184 909 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 TBC1D4O60343 1298 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 FGF18O76093 207 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 MOCS3O95396 460 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 SOD2P04179 222 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 TSPY1Q01534 308 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 ZNF280DQ6N043 979 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 LRRC31Q6UY01 552 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 CLEC20AQ6ZU45 233 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 KLHL23Q8NBE8 558 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 SLC35G2Q8TBE7 412 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 RIN2Q8WYP3 895 aaPredicted RBP16.37■□□□□ 0.21
SHMT2-202ENST00000414700 KCNK16Q96T55 309 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 GDF15Q99988 308 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 ACBD3Q9H3P7 528 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 MTUS1Q9ULD2 1270 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 INTUQ9ULD6 942 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 PCDHB12Q9Y5F1 795 aa16.37■□□□□ 0.21
SHMT2-202ENST00000414700 LINC01553A4QN01 128 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 GJB6O95452 261 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 ERBB2P04626 1255 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 BDNFP23560 247 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 BCAT1P54687 386 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 ARPP19P56211 112 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 PLCB3Q01970 1234 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 BST2Q10589 180 aaKnown RBP16.36■□□□□ 0.21
SHMT2-202ENST00000414700 HSP90B2PQ58FF3 399 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 ERICH1Q86X53 443 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 PGLYRP2Q96PD5 576 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 C17orf80Q9BSJ5 609 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 UBE2OQ9C0C9 1292 aaKnown RBP16.36■□□□□ 0.21
SHMT2-202ENST00000414700 ZCWPW1Q9H0M4 648 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 GOLPH3Q9H4A6 298 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 CNOT8Q9UFF9 292 aaKnown RBP16.36■□□□□ 0.21
SHMT2-202ENST00000414700 E5RJQ4 531 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 CSPG5O95196 566 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 NPR3P17342 541 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 DNAJB2P25686 324 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 MAP3K7CLP57077 242 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 GPC5P78333 572 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 ANKS3Q6ZW76 656 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 VPS52Q8N1B4 723 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 TTC9BQ8N6N2 239 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 ZMIZ2Q8NF64 920 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 PIWIL1Q96J94 861 aaKnown RBP16.36■□□□□ 0.21
SHMT2-202ENST00000414700 SMOQ99835 787 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 DUSP16Q9BY84 665 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 TSGA10Q9BZW7 698 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 TRIM7Q9C029 511 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 MED4Q9NPJ6 270 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 CDC23Q9UJX2 597 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 CDY1Q9Y6F8 540 aa16.36■□□□□ 0.21
SHMT2-202ENST00000414700 NCANO14594 1321 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 ATP8B3O60423 1300 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 AP1G2O75843 785 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 CA3P07451 260 aa16.35■□□□□ 0.21
SHMT2-202ENST00000414700 PPM1AP35813 382 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms