RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 LNX1Q8TBB1 728 aaPredicted RBP10.53□□□□□ -0.72
DDB1-202ENST00000414411 ZBTB9Q96C00 473 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 GDAP1L1Q96MZ0 367 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 SYT11Q9BT88 431 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 HERC2P3Q9BVR0 1158 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 ELOVL4Q9GZR5 314 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 SLC28A3Q9HAS3 691 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 ALG13Q9NP73 1137 aaKnown RBP10.53□□□□□ -0.72
DDB1-202ENST00000414411 HMGXB4Q9UGU5 601 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 ERICH4A6NGS2 130 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 H3BNC9 293 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 HCRTO43612 131 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 DNAJB1P25685 340 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 NOP2P46087 812 aaKnown RBP10.52□□□□□ -0.72
DDB1-202ENST00000414411 RAD23BP54727 409 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 MRPS25P82663 173 aaKnown RBP10.52□□□□□ -0.72
DDB1-202ENST00000414411 YWHAHQ04917 246 aaPredicted RBP10.52□□□□□ -0.72
DDB1-202ENST00000414411 UBE3AQ05086 875 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 RPS6KA1Q15418 735 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 PRPF38BQ5VTL8 546 aaKnown RBP10.52□□□□□ -0.72
DDB1-202ENST00000414411 METTL23Q86XA0 190 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 VPS52Q8N1B4 723 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 SLC4A11Q8NBS3 891 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 TPCN2Q8NHX9 752 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 PIK3R5Q8WYR1 880 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 HINFPQ9BQA5 517 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 ACBD6Q9BR61 282 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 C11orf84Q9BUA3 381 aaPredicted RBP10.52□□□□□ -0.72
DDB1-202ENST00000414411 DDX43Q9NXZ2 648 aaKnown RBP10.52□□□□□ -0.72
DDB1-202ENST00000414411 MTUS1Q9ULD2 1270 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 PCDHB4Q9Y5E5 795 aa10.52□□□□□ -0.72
DDB1-202ENST00000414411 REV3LO60673 3130 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 HAX1O00165 279 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 CYP26A1O43174 497 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 SYF2O95926 243 aaKnown RBP10.52□□□□□ -0.73
DDB1-202ENST00000414411 PDGFRBP09619 1106 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 CCDC172P0C7W6 258 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 CTSAP10619 480 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 PPP2R2DQ66LE6 453 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 EMBQ6PCB8 327 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 RSPO2Q6UXX9 243 aaPredicted RBP10.52□□□□□ -0.73
DDB1-202ENST00000414411 ANKS3Q6ZW76 656 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 SLFN11Q7Z7L1 901 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 CEP57Q86XR8 500 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 GLYCTKQ8IVS8 523 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 RBBP8NLQ8NC74 664 aaPredicted RBP10.52□□□□□ -0.73
DDB1-202ENST00000414411 OR10T2Q8NGX3 314 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 TIFAQ96CG3 184 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 TMEM176AQ96HP8 235 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 PKMYT1Q99640 499 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 NT5C1AQ9BXI3 368 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 ZBP1Q9H171 429 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 SNX25Q9H3E2 840 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 GOLPH3Q9H4A6 298 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 DPEP3Q9H4B8 488 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 ACP6Q9NPH0 428 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 BACE2Q9Y5Z0 518 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 IRAK3Q9Y616 596 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 NCANO14594 1321 aa10.52□□□□□ -0.73
DDB1-202ENST00000414411 CCDC66A2RUB6 948 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 A8MXQ7 604 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 KCNK3O14649 394 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 GRM6O15303 877 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 RNF40O75150 1001 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 ATP2C2O75185 946 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 PAEPP09466 180 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 KRT5P13647 590 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 PCSK1P29120 753 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 GLUD2P49448 558 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 GALCP54803 685 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 ERVFC1P60507 584 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 ZNF394Q53GI3 561 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 PPP1R15BQ5SWA1 713 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 FAM171BQ6P995 826 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 PRSS55Q6UWB4 352 aaPredicted RBP10.51□□□□□ -0.73
DDB1-202ENST00000414411 SND1Q7KZF4 910 aaKnown RBP eCLIP10.51□□□□□ -0.734e-7■□□□□ 8.9
DDB1-202ENST00000414411 LRRTM3Q86VH5 581 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 THEM5Q8N1Q8 247 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 PDCD7Q8N8D1 485 aaKnown RBP10.51□□□□□ -0.73
DDB1-202ENST00000414411 POF1BQ8WVV4 589 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 RIN2Q8WYP3 895 aaPredicted RBP10.51□□□□□ -0.73
DDB1-202ENST00000414411 CAVIN3Q969G5 261 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 PBKQ96KB5 322 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 ZSWIM1Q9BR11 485 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 CRTAC1Q9NQ79 661 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 GDF3Q9NR23 364 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 MTRRQ9UBK8 725 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 TMEM59LQ9UK28 342 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 CDH9Q9ULB4 789 aa10.51□□□□□ -0.73
DDB1-202ENST00000414411 EPOPA6NHQ4 379 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 H7C4K7 107 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 AGPSO00116 658 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 GLI1P08151 1106 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 PTPN1P18031 435 aaKnown RBP10.5□□□□□ -0.73
DDB1-202ENST00000414411 ACAT1P24752 427 aaKnown RBP10.5□□□□□ -0.73
DDB1-202ENST00000414411 GGCXP38435 758 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 USP8P40818 1118 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 LMAN1P49257 510 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 ORC1Q13415 861 aa10.5□□□□□ -0.73
DDB1-202ENST00000414411 GPM6BQ13491 265 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms