RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 ZNF334Q9HCZ1 680 aaPredicted RBP17.45■□□□□ 0.38
LINC00398-201ENST00000414407 GDE1Q9NZC3 331 aa17.45■□□□□ 0.38
LINC00398-201ENST00000414407 EPS15L1Q9UBC2 864 aa17.45■□□□□ 0.38
LINC00398-201ENST00000414407 CDH7Q9ULB5 785 aa17.45■□□□□ 0.38
LINC00398-201ENST00000414407 A0A1W2PQC6 194 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 SOBPA7XYQ1 873 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 O00370 1275 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 FOXN3O00409 490 aaPredicted RBP17.44■□□□□ 0.38
LINC00398-201ENST00000414407 TNFRSF10BO14763 440 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 TEX33O43247 280 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 RTN3O95197 1032 aaPredicted RBP17.44■□□□□ 0.38
LINC00398-201ENST00000414407 MYL4P12829 197 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 CCR2P41597 374 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 MAP3K7CLP57077 242 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 BPIFB4P59827 614 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 NR1I3Q14994 352 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 MEA1Q16626 185 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 GAREM2Q75VX8 874 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 GET4Q7L5D6 327 aaPredicted RBP17.44■□□□□ 0.38
LINC00398-201ENST00000414407 FAM71AQ8IYT1 594 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 NUP93Q8N1F7 819 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 NEK11Q8NG66 645 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 FGF13Q92913 245 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 NAP1L5Q96NT1 182 aaPredicted RBP17.44■□□□□ 0.38
LINC00398-201ENST00000414407 FAM207AQ9NSI2 230 aaPredicted RBP17.44■□□□□ 0.38
LINC00398-201ENST00000414407 IL37Q9NZH6 218 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 HESX1Q9UBX0 185 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 ZMYM5Q9UJ78 669 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 AJAP1Q9UKB5 411 aaPredicted RBP17.44■□□□□ 0.38
LINC00398-201ENST00000414407 TSPAN16Q9UKR8 245 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 FHOD1Q9Y613 1164 aa17.44■□□□□ 0.38
LINC00398-201ENST00000414407 NOTCH4Q99466 2003 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 C2CD4DB7Z1M9 353 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 MED7O43513 233 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 MOSPD3O75425 235 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 BEST1O76090 585 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 F11P03951 625 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 LAMP2P13473 410 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 GABRR2P28476 465 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 GBP2P32456 591 aaPredicted RBP17.43■□□□□ 0.38
LINC00398-201ENST00000414407 PPP3CCP48454 512 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 KLK7P49862 253 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 BCAT1P54687 386 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 MTMR3Q13615 1198 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 RAPGEF1Q13905 1077 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 DRAP1Q14919 205 aaPredicted RBP17.43■□□□□ 0.38
LINC00398-201ENST00000414407 NPAS3Q8IXF0 933 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 SHKBP1Q8TBC3 707 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 TFAP2BQ92481 460 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 TCEAL4Q96EI5 215 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 PCMTD1Q96MG8 357 aaPredicted RBP17.43■□□□□ 0.38
LINC00398-201ENST00000414407 GCNAQ96QF7 691 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 MYADMQ96S97 322 aa17.43■□□□□ 0.38
LINC00398-201ENST00000414407 MAGED2Q9UNF1 606 aaPredicted RBP17.43■□□□□ 0.38
LINC00398-201ENST00000414407 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00398-201ENST00000414407 C5orf42Q9H799 3197 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 A0A1W2PRU2 124 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 FAM92AA1XBS5 289 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 HHLA1C9JL84 531 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 SETSIPP0DME0 302 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 USP8P40818 1118 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 SLC5A3P53794 718 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 UBASH3AP57075 661 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 POLR2FP61218 127 aaKnown RBP17.42■□□□□ 0.38
LINC00398-201ENST00000414407 PTK2Q05397 1052 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 BST2Q10589 180 aaKnown RBP17.42■□□□□ 0.38
LINC00398-201ENST00000414407 GOLGA7BQ2TAP0 167 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 PKDCCQ504Y2 493 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 ARHGAP15Q53QZ3 475 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 TMEM150AQ86TG1 271 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 TTC30AQ86WT1 665 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 GJD3Q8N144 294 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 OVCA2Q8WZ82 227 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 NXPE3Q969Y0 559 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 UHRF1Q96T88 793 aaPredicted RBP17.42■□□□□ 0.38
LINC00398-201ENST00000414407 ZSWIM1Q9BR11 485 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 ATXN3LQ9H3M9 355 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 FBXO44Q9H4M3 255 aa17.42■□□□□ 0.38
LINC00398-201ENST00000414407 F8VZ95 297 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 XPO1O14980 1071 aaKnown RBP17.41■□□□□ 0.38
LINC00398-201ENST00000414407 EPHB6O15197 1021 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 CEBPBP17676 345 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 BRD2P25440 801 aaKnown RBP17.41■□□□□ 0.38
LINC00398-201ENST00000414407 DDX6P26196 483 aaKnown RBP eCLIP17.41■□□□□ 0.38
LINC00398-201ENST00000414407 YWHAQP27348 245 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 WEE1P30291 646 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 GNA15P30679 374 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 CLCN1P35523 988 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 JAM2P57087 298 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 USP46P62068 366 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 STKLD1Q8NE28 680 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 PDZD8Q8NEN9 1154 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 ZNF606Q8WXB4 792 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 SLITRK1Q96PX8 696 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 DOCK6Q96HP0 2047 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 NCANO14594 1321 aa17.41■□□□□ 0.38
LINC00398-201ENST00000414407 ANHXE9PGG2 379 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 CYP26A1O43174 497 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 TPM3P06753 285 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 PFKLP17858 780 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms