RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 HEPACAM2A8MVW5 462 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 ZNF263O14978 683 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 EEF1GP26641 437 aaKnown RBP15.58■□□□□ 0.08
CHD1-202ENST00000414220 MAP3K7CLP57077 242 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 IFRD2Q12894 506 aaPredicted RBP15.58■□□□□ 0.08
CHD1-202ENST00000414220 EXOC3L4Q17RC7 722 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 SGO2Q562F6 1265 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 MFSD6LQ8IWD5 586 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 CELF5Q8N6W0 485 aaKnown RBP15.58■□□□□ 0.08
CHD1-202ENST00000414220 MAB21L3Q8N8X9 362 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 OVCA2Q8WZ82 227 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 JAKMIP2Q96AA8 810 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 TWNKQ96RR1 684 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 TUBGCP2Q9BSJ2 902 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 TTLL2Q9BWV7 592 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 INTS2Q9H0H0 1204 aaKnown RBP15.58■□□□□ 0.08
CHD1-202ENST00000414220 KIF9Q9HAQ2 790 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 CSNK1G1Q9HCP0 422 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 TRPC7Q9HCX4 862 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 HESX1Q9UBX0 185 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 HMGXB4Q9UGU5 601 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 NFE2L3Q9Y4A8 694 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 PCDHB4Q9Y5E5 795 aa15.58■□□□□ 0.08
CHD1-202ENST00000414220 GTPBP10A4D1E9 387 aaKnown RBP15.57■□□□□ 0.08
CHD1-202ENST00000414220 KCNJ18B7U540 433 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 NARSO43776 548 aaKnown RBP15.57■□□□□ 0.08
CHD1-202ENST00000414220 ABL1P00519 1130 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 CKMP06732 381 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 USP17L7P0C7H9 530 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 VDRP11473 427 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 CD19P15391 556 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 NPR3P17342 541 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 VIPR2P41587 438 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 RAD23BP54727 409 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 MFAP3P55082 362 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 GPC5P78333 572 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 KCNJ12Q14500 433 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 STILQ15468 1287 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 VWA3BQ502W6 1294 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 CAVIN1Q6NZI2 390 aaKnown RBP15.57■□□□□ 0.08
CHD1-202ENST00000414220 CC2D1AQ6P1N0 951 aaPredicted RBP15.57■□□□□ 0.08
CHD1-202ENST00000414220 TMEM270Q6UE05 265 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 PAQR9Q6ZVX9 377 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 SLC4A11Q8NBS3 891 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 ST13P5Q8NFI4 369 aaPredicted RBP15.57■□□□□ 0.08
CHD1-202ENST00000414220 CSGALNACT1Q8TDX6 532 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 WHAMMQ8TF30 809 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 DNASE1L2Q92874 299 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 FBXO32Q969P5 355 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 KCNK16Q96T55 309 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 ARID3AQ99856 593 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 RPP25Q9BUL9 199 aaKnown RBP15.57■□□□□ 0.08
CHD1-202ENST00000414220 SLC46A2Q9BY10 475 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 DUSP16Q9BY84 665 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 NDST4Q9H3R1 872 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 PNPLA8Q9NP80 782 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 C5orf42Q9H799 3197 aa15.57■□□□□ 0.08
CHD1-202ENST00000414220 PAEPP09466 180 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 HDCP19113 662 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 CDK11BP21127 795 aaKnown RBP15.56■□□□□ 0.08
CHD1-202ENST00000414220 GDI1P31150 447 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 SLC5A3P53794 718 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 PLCB2Q00722 1185 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 PRKCQQ04759 706 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 TAF10Q12962 218 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 KLHL40Q2TBA0 621 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 SKOR2Q2VWA4 1001 aaPredicted RBP15.56■□□□□ 0.08
CHD1-202ENST00000414220 ARHGAP29Q52LW3 1261 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 STXBP5Q5T5C0 1151 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 PPP1R26Q5T8A7 1209 aaPredicted RBP15.56■□□□□ 0.08
CHD1-202ENST00000414220 ARHGAP17Q68EM7 881 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 TXNDC8Q6A555 127 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 SMYD5Q6GMV2 418 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 RRAGAQ7L523 313 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 IRF2BP1Q8IU81 584 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 SIX5Q8N196 739 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 FBXL6Q8N531 539 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 BPIFB1Q8TDL5 484 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 ASIC4Q96FT7 647 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 MED15Q96RN5 788 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 UBXN6Q9BZV1 441 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 UBE2TQ9NPD8 197 aaPredicted RBP15.56■□□□□ 0.08
CHD1-202ENST00000414220 TDP1Q9NUW8 608 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 HCN4Q9Y3Q4 1203 aa15.56■□□□□ 0.08
CHD1-202ENST00000414220 BDP1A6H8Y1 2624 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 CHADO15335 359 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 KRT5P13647 590 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 FCARP24071 287 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 CACNA2D1P54289 1103 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 MYL5Q02045 173 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 GRM2Q14416 872 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 ZNF268Q14587 947 aaPredicted RBP15.55■□□□□ 0.08
CHD1-202ENST00000414220 SLC44A4Q53GD3 710 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 TCP11X2Q5H9J9 407 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 C1orf228Q6PIY5 440 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 VITQ6UXI7 678 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 CLEC20AQ6ZU45 233 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 TMEM150AQ86TG1 271 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 ANKRD52Q8NB46 1076 aa15.55■□□□□ 0.08
CHD1-202ENST00000414220 LMO3Q8TAP4 145 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms