RNA–Protein interactions for RNA: ENST00000409758.1

AP001341.1-201, humanhuman

TSL 3 BASIC

Gene AP001341.1, Length 763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001341.1-201ENST00000409758 PPP3CCP48454 512 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 SNRPFP62306 86 aaKnown RBP12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 IFRD2Q12894 506 aaPredicted RBP12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 BIRC3Q13489 604 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 PSMD6Q15008 389 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 E2F4Q16254 413 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 EML3Q32P44 896 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 SYT13Q7L8C5 426 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 TTC30AQ86WT1 665 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 TSTD1Q8NFU3 115 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 RIN3Q8TB24 985 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 ZNF507Q8TCN5 953 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 PCED1BQ96HM7 432 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 SLITRK1Q96PX8 696 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 CGRRF1Q99675 332 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 C7orf25Q9BPX7 421 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 MRPL45Q9BRJ2 306 aaKnown RBP12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 MED10Q9BTT4 135 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 BLZF1Q9H2G9 400 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 LINC00597Q9H2U6 94 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 MAGEF1Q9HAY2 307 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 SMPD4Q9NXE4 827 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 GCNT4Q9P109 453 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 ARHGAP26Q9UNA1 814 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 CEP250Q9BV73 2442 aa12.9□□□□□ -0.34
AP001341.1-201ENST00000409758 ATP8B3O60423 1300 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 NCOR2Q9Y618 2525 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 F8VP50 259 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 LEFTY2O00292 366 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 SLC9A3R1O14745 358 aaPredicted RBP12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 TACC1O75410 805 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 RHOBTB1O94844 696 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 YEATS4O95619 227 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 CST3P01034 146 aaPredicted RBP12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 PDIA4P13667 645 aaKnown RBP12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 PFKLP17858 780 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 HOXD13P35453 343 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 AFMP43652 599 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 DGKEP52429 567 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 SEC13P55735 322 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 CYP24A1Q07973 514 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 USP4Q13107 963 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 DMC1Q14565 340 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 SF3A2Q15428 464 aaKnown RBP12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 C2orf27AQ580R0 203 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 NAIF1Q69YI7 327 aaPredicted RBP12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 SHC4Q6S5L8 630 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 UNC13DQ70J99 1090 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 GOLGA5Q8TBA6 731 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 SYAP1Q96A49 352 aaPredicted RBP12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 CHAMP1Q96JM3 812 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 C8orf48Q96LL4 319 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 CNTNAP3BQ96NU0 1288 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 CNTNAP3Q9BZ76 1288 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 ELOVL4Q9GZR5 314 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 SLC39A2Q9NP94 309 aa12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 POLR3BQ9NW08 1133 aaPredicted RBP12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 CGNQ9P2M7 1197 aaKnown RBP12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
AP001341.1-201ENST00000409758 DMXL1Q9Y485 3027 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 UBE4BO95155 1302 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 PATJQ8NI35 1801 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 TICRRQ7Z2Z1 1910 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 ZNF840PA6NDX5 716 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 TGFB1I1O43294 461 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 EPN2O95208 641 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 FAM163BP0C2L3 166 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 ZNF806P0C7X5 589 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 MBL2P11226 248 aaPredicted RBP12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 ATICP31939 592 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 MYL6P60660 151 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 USP46P62068 366 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 NOP14P78316 857 aaKnown RBP12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 CREB5Q02930 508 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 TAF10Q12962 218 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 USP39Q53GS9 565 aaKnown RBP12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 EPM2AIP1Q7L775 607 aaPredicted RBP12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 LIMS2Q7Z4I7 341 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 SCFD1Q8WVM8 642 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 NACA2Q9H009 215 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 CFAP97Q9P2B7 532 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 PCDHGA5Q9Y5G8 931 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 CPQQ9Y646 472 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 MYH11P35749 1972 aa12.88□□□□□ -0.35
AP001341.1-201ENST00000409758 SCAMP3O14828 347 aaKnown RBP12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 ALDH1A2O94788 518 aa12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 P4HA1P13674 534 aa12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 TRIM21P19474 475 aaKnown RBP12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 YWHAQP27348 245 aa12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 CASP1P29466 404 aa12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 MPLP40238 635 aa12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 KNOP1Q1ED39 458 aaKnown RBP12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 ZNF699Q32M78 642 aa12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 PLK5Q496M5 336 aa12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 CNNM4Q6P4Q7 775 aa12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 FILIP1Q7Z7B0 1213 aa12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 DDX42Q86XP3 938 aaKnown RBP eCLIP12.87□□□□□ -0.35
AP001341.1-201ENST00000409758 HSCBQ8IWL3 235 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms