RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ZNF268Q14587 947 aaPredicted RBP14.16□□□□□ -0.14
SDF4-203ENST00000403997 EDRF1Q3B7T1 1238 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 ZCWPW2Q504Y3 356 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 ZNF658Q5TYW1 1059 aaPredicted RBP14.16□□□□□ -0.14
SDF4-203ENST00000403997 SPOPLQ6IQ16 392 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 ACOT1Q86TX2 421 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 ERCC4Q92889 916 aaPredicted RBP14.16□□□□□ -0.14
SDF4-203ENST00000403997 SMARCE1Q969G3 411 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 EEF2KMTQ96G04 330 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 GSDMAQ96QA5 445 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 SLC22A12Q96S37 553 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 FAM83CQ9BQN1 747 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 CHRDQ9H2X0 955 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 EBF3Q9H4W6 596 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 TRPM5Q9NZQ8 1165 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 HOOK1Q9UJC3 728 aaKnown RBP14.16□□□□□ -0.14
SDF4-203ENST00000403997 ZNF638Q14966 1978 aaKnown RBP14.16□□□□□ -0.14
SDF4-203ENST00000403997 ATP8B3O60423 1300 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 RIF1Q5UIP0 2472 aaKnown RBP14.15□□□□□ -0.14
SDF4-203ENST00000403997 NUP210Q8TEM1 1887 aaPredicted RBP14.15□□□□□ -0.14
SDF4-203ENST00000403997 CETN3O15182 167 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 ASS1P00966 412 aaKnown RBP14.15□□□□□ -0.14
SDF4-203ENST00000403997 NDST1P52848 882 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 NOP14P78316 857 aaKnown RBP14.15□□□□□ -0.14
SDF4-203ENST00000403997 IFRD2Q12894 506 aaPredicted RBP14.15□□□□□ -0.14
SDF4-203ENST00000403997 RUNX3Q13761 415 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 PON2Q15165 354 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 ZNF528Q3MIS6 628 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 TRIM68Q6AZZ1 485 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 TXNDC11Q6PKC3 985 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 RIN3Q8TB24 985 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 TIGD1Q96MW7 591 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 TTLL2Q9BWV7 592 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 IMPG2Q9BZV3 1241 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 TMEM30AQ9NV96 361 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 GCNT4Q9P109 453 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 PCDHA5Q9Y5H7 936 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 DENND4CQ5VZ89 1909 aa14.15□□□□□ -0.14
SDF4-203ENST00000403997 ZNF840PA6NDX5 716 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 LMNAP02545 664 aaKnown RBP14.14□□□□□ -0.15
SDF4-203ENST00000403997 EPB41P11171 864 aaKnown RBP14.14□□□□□ -0.15
SDF4-203ENST00000403997 ARSAP15289 507 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 YWHAQP27348 245 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 GTF2H1P32780 548 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 PPP3CCP48454 512 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 PDE6CP51160 858 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 ENPEPQ07075 957 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 TAF10Q12962 218 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 ORC1Q13415 861 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 LRRC32Q14392 662 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 MTF1Q14872 753 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 PDGFRLQ15198 375 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 DGKKQ5KSL6 1271 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 TSSK4Q6SA08 328 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 FAM35AQ86V20 835 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 UNC93AQ86WB7 457 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 ADSSL1Q8N142 457 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 NUP93Q8N1F7 819 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 CCDC150Q8NCX0 1101 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 TAS1R2Q8TE23 839 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 SH3RF2Q8TEC5 729 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 ATRIPQ8WXE1 791 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 SLITRK1Q96PX8 696 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 KCNK16Q96T55 309 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 TSG101Q99816 390 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 IER2Q9BTL4 223 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 TMEM8AQ9HCN3 771 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 HPS4Q9NQG7 708 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 RBM12Q9NTZ6 932 aaKnown RBP14.14□□□□□ -0.15
SDF4-203ENST00000403997 DUS2Q9NX74 493 aaKnown RBP14.14□□□□□ -0.15
SDF4-203ENST00000403997 VPS13AQ96RL7 3174 aa14.14□□□□□ -0.15
SDF4-203ENST00000403997 KINO60870 393 aaKnown RBP14.13□□□□□ -0.15
SDF4-203ENST00000403997 AP1G2O75843 785 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 RTN3O95197 1032 aaPredicted RBP14.13□□□□□ -0.15
SDF4-203ENST00000403997 PFKLP17858 780 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 TRIM21P19474 475 aaKnown RBP14.13□□□□□ -0.15
SDF4-203ENST00000403997 ASPAP45381 313 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 IFNAR2P48551 515 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 AMPD2Q01433 879 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 PPP2R5DQ14738 602 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 ZNF77Q15935 545 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 ANKRD40Q6AI12 368 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 ISM2Q6H9L7 571 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 MAMSTRQ6ZN01 415 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 PAQR9Q6ZVX9 377 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 CRYBG2Q8N1P7 616 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 SPATA20Q8TB22 786 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 SMARCD1Q96GM5 515 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 GTPBP4Q9BZE4 634 aaKnown RBP14.13□□□□□ -0.15
SDF4-203ENST00000403997 CYP3A43Q9HB55 503 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 APOBEC3GQ9HC16 384 aaKnown RBP14.13□□□□□ -0.15
SDF4-203ENST00000403997 DMAP1Q9NPF5 467 aaPredicted RBP14.13□□□□□ -0.15
SDF4-203ENST00000403997 PRMT8Q9NR22 394 aaPredicted RBP14.13□□□□□ -0.15
SDF4-203ENST00000403997 ZSCAN32Q9NX65 697 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 HMGXB4Q9UGU5 601 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 ARHGAP26Q9UNA1 814 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 FAM186AA6NE01 2351 aa14.13□□□□□ -0.15
SDF4-203ENST00000403997 COL4A2P08572 1712 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 USP34Q70CQ2 3546 aa14.12□□□□□ -0.15
SDF4-203ENST00000403997 PTPRDP23468 1912 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms